Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01291 atGGCCGCAGCCTTGGAGTGCTGGTCCAgccgcgccaccaccgccgccgccgatgacgacgccgTGGAGCAGGTCCTCATGCGCACCCACCACAGATCCGAAGGCACCGCCACCCCCAAAGACCCCTCCTCCCTCCCTGTCCACAAGAAGCTCCAGAAGCTCACTCGCAACGTCTCCGAAGCCATAGCTTCCTTCAAAAACTCCCTCAACCTCGATTCCCCTCCTTCCTCCAAAGCCGACGCTTCCTCCAGAAAACTCGCCTGGGGCACCGTCGTTCGCAACCTCACTCAGCTCTACCCCGGAAGCCAGTTGCCGGAGAAGCTCATGTCCAACATTCGCAAGCATTATGATTCATTGCCTCTCAGTTATGCACAGGCTGAGTTTGATATGAAGGATGTGTTTCTTCACATAAAGCTGATGGAGCAAGCTTCGGAGAGTGAGCAGCCTGCGATTTTGATCCAAGAGGAGTGTGATGATGAGGCTCAGGTTCAGGGTTCTCCTTTGAGGCTCACGTTTGCTTGCAACTCTCCGATTTCGTGGCCTGCGATGTCGGGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAGGATGCAGATCTTTGAGAAGAAGGGTTTCACCTTGGGGGTTGTGCTTCTTGTGGTTCAGTCTGGGCATGATAAGTTGGTGAGGACCAGGGTTGAAAATGCTTTGAAGTTTGCCATGAAGAGGTCCAAAACTGGTTCTGTGAAGCTCCCCTTTGGGCTCTGTGGGTGCCAGGAGGAGAATTCTAAAGGGAGAGAGCTTGGGGAGATTGAAGAAGAAGCCGGTGATGGTTGCCGCGGAAAGGAGTTTGAGAATTCAGGCCAAAGGATTCAGCTTCAGGTGCCTTTGCCTTCTTCATGTTTTGTTGTGTCAGTGGATGAATGGCAGACCATAAAGTCAGGTGGGGATGAGATTGAGAAATGGTTGTTGAACTCAGATAGTGTTGAGTTTGTGGAGCAGATTGGACCTAATTCGTATAAGGGAGTGTATATGGGGAAGAGGGTTGGGATTGAGAAGCTAAAGGGGTGTGATAAAGGGAATTCTTACGAGTTTGAGCTTCATAAAGATCTGCTGGAACTGATGACTTGTGGTCATAGAAACATTCTGCAGTTCTGTGGTATTTGTGTGGATGATAATCATGGGTTTTGTGTGGTGACCAAGTTCATGGAAGGTGGGTCTGTTCATGACTTGATGTTGAAGAACAAGAAGCTTCAGAATAAGGATATTGTGAGGATTGCTGTTGATGTGGCCGAAGGGATGAAGTTTATGAATGATCACGGTGTTGCATATAGAGACCTTAACACACAGAGGATTCTGTTGGATAGGCATGGGAATGCTTGCTTGGGAGACATGGGCATAGTCACTGCCTGCAAGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCAGAGATAATTGCAGGGGATCCAGAGAATGTGACAGAGACATGGATGAGTAATGTTTATAGTTTTGGAATGGTAATTTGGGAGATGGTAACTGGTGAAGCAGCTTATTCTTCATTTTCACCGGTGCAAGCTGCAGTGGGCATTGCGGCATGTGGCCTTAGACCTGAAATTCCAAAAGACTGCCAACAAACTCTAAAATACATTATGACAAAGTGCTGGAACAACACCCCTTCAAAACGCCCTCAGTTCTCTGAAATTTTAGCCATATTGCTACGACCAAACAATAGATAA 1737 0.468 MAAALECWSSRATTAAADDDAVEQVLMRTHHRSEGTATPKDPSSLPVHKKLQKLTRNVSEAIASFKNSLNLDSPPSSKADASSRKLAWGTVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKDVFLHIKLMEQASESEQPAILIQEECDDEAQVQGSPLRLTFACNSPISWPAMSGALDSSSICCKRMQIFEKKGFTLGVVLLVVQSGHDKLVRTRVENALKFAMKRSKTGSVKLPFGLCGCQEENSKGRELGEIEEEAGDGCRGKEFENSGQRIQLQVPLPSSCFVVSVDEWQTIKSGGDEIEKWLLNSDSVEFVEQIGPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFCGICVDDNHGFCVVTKFMEGGSVHDLMLKNKKLQNKDIVRIAVDVAEGMKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKYIMTKCWNNTPSKRPQFSEILAILLRPNNR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01291 578 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 576 - -
Cca05g01291 578 PANTHER SERINE-THREONINE PROTEIN KINASE 1 576 - -
Cca05g01291 578 ProSiteProfiles Protein kinase domain profile. 322 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01291 578 SUPERFAMILY Protein kinase-like (PK-like) 306 572 IPR011009 -
Cca05g01291 578 PRINTS Tyrosine kinase catalytic domain signature 393 406 IPR001245 GO:0004672|GO:0006468
Cca05g01291 578 PRINTS Tyrosine kinase catalytic domain signature 429 447 IPR001245 GO:0004672|GO:0006468
Cca05g01291 578 PRINTS Tyrosine kinase catalytic domain signature 499 521 IPR001245 GO:0004672|GO:0006468
Cca05g01291 578 PRINTS Tyrosine kinase catalytic domain signature 543 565 IPR001245 GO:0004672|GO:0006468
Cca05g01291 578 Pfam Protein tyrosine and serine/threonine kinase 357 571 IPR001245 GO:0004672|GO:0006468
Cca05g01291 578 Gene3D Transferase(Phosphotransferase) domain 1 315 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01291 Cca-Chr5 30735371 30739924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01291 305 572 MAP Kinase Kinase Kinase AT2G17700 33.455 6.61e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Cca05g01291 PK_Tyr_Ser-Thr 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01291 - - pvu:PHAVU_008G258400g 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01291 05 30735371 30739924 Cca05g01291 05 30735371 30739924 ECH
Cca01g00633 01 8202597 8206690 Cca05g01291 05 30735371 30739924 PCT