Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01286 ATGGGAGAGCTTAGGATCAGAAGCGATTTAGTAGAAAATGAATTATGGCCAAAGAAACCGACTCTAATTAAGCCTATTCCTATGAGAGCTCAAAGTAATGTGTCTATAGGGTATGGTTCATCCTTTCAACCATGGCAAAAACCCTCCAATCCAGTTAATGAGCTTGTCACCATTCCAGAAAACGACAATCATCTTACAGAGGAAAACGCTTCAATTAATGATCATAACACAGCCAATGAAGCCCAACCAAACATTGAGCATGAAACCAAGAAGAAGCTCAAGAGAATCATTTCAAACCGACATTCTGCTCGAAGATCGAGATTGAAGAAACTTGCATACATGGAGGATTTGGAAAACATCGTGAAATCTCACAAGAAGAAAATAGAGTTCCTGAATGAACAAATTGCAGAGCAAGAAAAGGAGCAGCTATTGTTGCAAATTGAGCATCATACATTGAAATACCATATGGCTGCTCGTGAAAAGCACAGAATACTTCAAGAAGTTGAGATTGAAAAGAAGAGAGCAGAAGAGAGTAGGCTGAGAGAAGTAGAAAGGAAATTAACAGCTGAAGCTCAGGCAAGGAAAATGCTTAATTTCACTTCTTTGCAGATCATGTCCAATTCCAACTTTAACCCTTCAGCCTTGCCAGGATTGAATCATAGAAACTGA 669 0.3901 MGELRIRSDLVENELWPKKPTLIKPIPMRAQSNVSIGYGSSFQPWQKPSNPVNELVTIPENDNHLTEENASINDHNTANEAQPNIEHETKKKLKRIISNRHSARRSRLKKLAYMEDLENIVKSHKKKIEFLNEQIAEQEKEQLLLQIEHHTLKYHMAAREKHRILQEVEIEKKRAEESRLREVERKLTAEAQARKMLNFTSLQIMSNSNFNPSALPGLNHRN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01286 222 Coils Coil 114 148 - -
Cca05g01286 222 Gene3D - 89 197 - -
Cca05g01286 222 SMART brlzneu 86 151 IPR004827 GO:0003700|GO:0006355
Cca05g01286 222 Coils Coil 158 193 - -
Cca05g01286 222 PANTHER ACTIVATOR OF SPOMIN LUC3 10 194 - -
Cca05g01286 222 CDD bZIP_plant_GBF1 92 141 IPR045314 GO:0003700|GO:0006355
Cca05g01286 222 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Cca05g01286 222 Pfam bZIP transcription factor 89 141 IPR004827 GO:0003700|GO:0006355
Cca05g01286 222 SUPERFAMILY Leucine zipper domain 91 145 IPR046347 GO:0003700|GO:0006355
Cca05g01286 222 PANTHER BASIC LEUCINE ZIPPER 34 10 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01286 Cca-Chr5 30665795 30668084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01286 91 167 bZIP Transcription Factor Family AT3G58120 35.065 3.99e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca05g01286 bZIP_1 5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01286 - - ccaj:109816036 427.557