Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01284 ATGGCGTCGCCCTGCGTCACGGACGCTGCCCGCGCGGCCGCCTGCAGGGACGGGGCGGCGGCGTCTCACCTCAAAACGATCTCAATCTTGGTCATCTTCGTGACGAGCGTGGCGGGGATGTCGTCGCCGGTGCTGCTGGCGGGAGTCTTCAGGGGAAAGGCGGTCTACGACAAGGCCTTGGTGGTCATAAAGTGTTTCGCGGCGGGCGTCATCCTCTCCACCTCGCTCGTCCACGTGCTCCCCGACGCGTACGCCGCACTCGCCGACTGCCACGTGGCGTCGCGCCATCCCTGGAGGGACTTCCCCTTCGCCGGTCTGGTCACGCTCGTGGGGGCGCTCCTCGCTCTCCTCGTGGACCTCGCCGCCAGCTCGCACGTGGAGCACGCGCAGTACgcgcccgtggtggcgcaggagaaggaggcggcggtggagctcggcggcggcggcggcggcgAGGGGGAGAGGGGTGACGAGGTGGTGAAACTTAAGCAGAGGCTGGTCTCGCAGGTGCTTGAGATTGGGATTATTTTTCACTCTGTCATCATTGGGGTGACTATGGGGATGTCTCAGAACGTTTGCACTATTCGCCCTCTCGTCACTGCTTTGGCTTTTCATCAGATTTTCGAAGGCATGGGTCTCGGTGGCTGCGTCGCTCAGAAACTAGAAAGTGACGATCGCAAATTGGAAACGTATAGCTTGACCTTAAGAGCATGTGGCTGA 720 0.5569 MASPCVTDAARAAACRDGAAASHLKTISILVIFVTSVAGMSSPVLLAGVFRGKAVYDKALVVIKCFAAGVILSTSLVHVLPDAYAALADCHVASRHPWRDFPFAGLVTLVGALLALLVDLAASSHVEHAQYAPVVAQEKEAAVELGGGGGGEGERGDEVVKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVTALAFHQIFEGMGLGGCVAQKLESDDRKLETYSLTLRACG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01284 239 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 4 219 - -
Cca05g01284 239 TIGRFAM zip: ZIP zinc/iron transport family 11 220 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cca05g01284 239 PANTHER ZINC/IRON TRANSPORTER 4 219 - -
Cca05g01284 239 Pfam ZIP Zinc transporter 154 220 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca05g01284 239 Pfam ZIP Zinc transporter 23 128 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01284 Cca-Chr5 30649498 30650418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01284 1 219 Inorganic Solute Cotransporters AT2G30080 63.559 7.57e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01284 K14709 - gmx:100797310 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01284 05 30649498 30650418 Cca05g01284 05 30649498 30650418 ECH
Cca05g01284 05 30649498 30650418 Cca01g00656 01 8590018 8592928 ECH
Cca01g00656 01 8590018 8592928 Cca05g01284 05 30649498 30650418 PCT