Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01283 ATGACTAAATTTCCTCAAACAAAATGTCAATGGCTCATCTTATGGGCCATTGGCCTCATCGGGGGAACGATTTCTGTGATCATTCCTTTGATCTTCTATTTATCATATTTGGGAGATGATAAGGTCAATGTTTCTGTGATGAATGCTACTCTCACGGAATTCAATTACACTAAAAATACCCTTTACTATAACCTCATCCTCAACATCTCAATCTCTCACACCGTCTACTATGACTACATAGATGCAAGTATGATGTACCAAAATATCTCCTTTGATTCCCAAACTGTGGTAATGTTCAACAAAAGCTTTAGTGAGTTGCACATGAACCTCAGAGGTCAACATGTGATGGCCTTCATCACCAACCAGATCTCAAAGTTGAATAAGCAAAAAATGTATGGGGTTTACCACATTCATTTGAAGTTGTGCCCTATGTTTAGGTTTGAAACAAACAAGCTCATGCCTATCATTCATTGTGACTTGCAAGTATCTCTAAAATCCAACAAAGAGACCACACCAATTGATGGATTTCATGCAACCAAATGTGACTTACGTTATGATCTTAGTGATTAG 570 0.3754 MTKFPQTKCQWLILWAIGLIGGTISVIIPLIFYLSYLGDDKVNVSVMNATLTEFNYTKNTLYYNLILNISISHTVYYDYIDASMMYQNISFDSQTVVMFNKSFSELHMNLRGQHVMAFITNQISKLNKQKMYGVYHIHLKLCPMFRFETNKLMPIIHCDLQVSLKSNKETTPIDGFHATKCDLRYDLSD 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01283 189 PANTHER OS05G0367900 PROTEIN 9 183 IPR044839 GO:0098542
Cca05g01283 189 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 9 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01283 Cca-Chr5 30632454 30633023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01283 42 164 SNARE and Associated Proteins AT1G32270 28.467 1.47e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01283 - - oeu:111404003 90.8929