Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01278 ATGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTGCATCAGTGGTATTGGTATATACAACATATTCCACTGGAACCGACAAATATACCGTGCACTTTCTCCACTCTACATGTTGAGGTTCCTCAAAACCACTGGCATTGAAGGATGGATGTCATTGGGTGGAGTGGTACTTTCAATCACAGGGGTGGAGACAATGTATGCTGACTTGGGTCATTTTTCAGCACTCTCAATAAAGATTGCTTTCACATGTCTAGTGTATCCCTGCCTGATTTTGGCATATATGGGTGAGGCTGCATTTCTCTCAAAGCACCATTATGACATTCAAGGAAGTTTCTACAAAGCCATTCCAGAAACTGTATTTTGGCCAGTTTTCATAGTGGCCACTTTTGCTGCCATTGTTGGAAGTCAAGCAGTGATTTCTGCAACCTTTTCCATCATAAGCCAGTGTTGTGCATTAAATTGTTTTCCTCCAGTTAAGATTGTTCATACATCAAGCAGAATATACGGACAAATTTATGTCCCAGAAGTCAATTGGACATTAATGTGCCTTTGTTTAGCCGTCACAATTGGCCTAAGGGATACAAACATGATGGGTCATGCATATGGGTTGGCTATCACCACTGTCATGTTTGTGACAACATGCTTGATGACACTAGTAATGGTCATTGTTTGGAAGCAAGGAATAATAAAAGCCATTATATGTTTGCTGTTGTTTGGATCAATTGAACTGCTCTACATCTCAGCTTCTATCTGCAAAGCCCCTGAAGGAGGATGGATCCCCCTTGTGCTATCTTTTATCTTTATGAGTATAATGTTCACTTGGAACTATGGAACAATGAAGAAACATGAATTTGATGTGGAAAACAAGGTTTCAACAAGCAAGATCCTATCCTTGGGGCCTTGCTTAGGCATGGTTCGTGTCCCCGGAATAGGAATCATTTTCAGTAATCTGGCTTCAGGTGTTCCTGCTATTTTTGGCCATTTCGTTACAAACTTGCCAGCATTCCATCAAGTGCTAGTTTTTGTATGTGTCAAATCAGTTCAAGTTCCTTGTGTCTGCGACAATGAACGGTTGATCATCAGCAGGATCGGCCCGAAGGAGTACCAGATGTTTTGTTGCATTGTCAGGTATGGTTACAAGGATCTGCAACAAGAGAACTACAATTTTGAGAACAAATTGGTAAGTACAATAATACAGTTTGTAGAAATGGAGAGTGCTCCAGAACCAACACAACAAGAATTGTGTATGGATGGTGGAAACTTAAATGTGGCACACCTTGGTGTTTCACAACACACTTTGCATAGCTCATGTTGTGTAGAGAAAAACTTCCCATTTTCATGCGTTTTACGTGTGAAGAAGAATGATGATGAACATCTTCAAGAGTCTCCCTATAAAGACGAGTCTATGCAGATTTTAAAGGCCAAGGAGTCAGGTGTTACCTATATACTTGGACATTCCTATGCAGAGGCAAAGAAATCATCCTCCATTCTAAAGAAATTTGCCATAGATGTTGTTTATGCTTTCCTAAGCAAAAATTGCAGAGATCCTGATGTTTTTCTGAACGTAGCTCATACTTCTTTGCTAGAAGTTGGTATGGTTTACCAAATCTAA 1611 0.4035 MFAPVVAAWLLCISGIGIYNIFHWNRQIYRALSPLYMLRFLKTTGIEGWMSLGGVVLSITGVETMYADLGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHYDIQGSFYKAIPETVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPPVKIVHTSSRIYGQIYVPEVNWTLMCLCLAVTIGLRDTNMMGHAYGLAITTVMFVTTCLMTLVMVIVWKQGIIKAIICLLLFGSIELLYISASICKAPEGGWIPLVLSFIFMSIMFTWNYGTMKKHEFDVENKVSTSKILSLGPCLGMVRVPGIGIIFSNLASGVPAIFGHFVTNLPAFHQVLVFVCVKSVQVPCVCDNERLIISRIGPKEYQMFCCIVRYGYKDLQQENYNFENKLVSTIIQFVEMESAPEPTQQELCMDGGNLNVAHLGVSQHTLHSSCCVEKNFPFSCVLRVKKNDDEHLQESPYKDESMQILKAKESGVTYILGHSYAEAKKSSSILKKFAIDVVYAFLSKNCRDPDVFLNVAHTSLLEVGMVYQI 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01278 536 TIGRFAM kup: potassium uptake protein 1 536 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca05g01278 536 PANTHER POTASSIUM TRANSPORTER 465 535 - -
Cca05g01278 536 PANTHER POTASSIUM TRANSPORTER 1 406 - -
Cca05g01278 536 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 465 535 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca05g01278 536 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 406 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca05g01278 536 Pfam K+ potassium transporter 1 381 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01278 Cca-Chr5 30575631 30581982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01278 1 536 Inorganic Solute Cotransporters AT2G30070 66.231 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01278 K03549 - gmx:100798458 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01278 05 30575631 30581982 Cca05g01278 05 30575631 30581982 ECH