Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01262 ATGAACCTCTTGACACCATCATCTTCATCCACCCTCACTTTGGACCCATCCAAAGGTGCCACTGCAGGGTATCTCACAACAATCTTTCGCAGGATTCTCTGCTCTGGTGGCCTTCCAACACACCCCTTAGACCAAATCAGCGAACGTGATTCAAAGTCAAAGATGAGTGGCAAAGTTCAAGAATTTAAACCTAAGCAAAGCACTCAATCTACCACCACCTCTACTATTACTCCTGGAATAGTAGAAAGGTTAATGGGCTTGGAACCAATGGGAGAGAGAGAAACAAAAACCAGCATTGAAGCAACACCAAGTTCTTCACTTTCACGTAGCAAATCCATGAACTCTGTTGTGGAGCACTTGGGCGAATGCAAGCGAATGGAGGGCCTTCACAAGCATGCTAAATCTTCATCATTCCACGAGGTTTCAACTTTCTACTTGCATGAAAATGAGAACTTCTTGGTACTCAGCTTCAAAAGCGGATGTGATGATGGTGTAGAATTCAGGTCCAAGGGGAGAAAAAAAGAAAAGGGTTTGAAGGAGAGGGGTGAGTTCAAGAAAAACAAGAGAGAAAATGTGCATGATGAGAAGGTGAACTTGTCTGACATGTCTTCTGCCAATGTTGGAAACGATGGTTGTCAACATAAACTTCAATTTGCCAACACTTCGCCACTGTTCATGGGCTTGTTTGAGAAGGAGAACGTTGATTCAGAAACTAAGAGATTCTCACACTCCATGAAGAGCAAGGAAGTTACCAATGGTGCGAAAGTGAAAAGGAGAAAGAAGGGAACAACATGTTATGCAGAAAAGAAGGTGGACACTGAATGCAATTCTGAAGAAGATTCAAGCCCAGTTTCTATCTTTGATTTTGAGCGTCAAACTCCAAGAACAGAGGTGGATTCTTTTGGTGTAGATACAAGTTGGAGAAGAAAATTGTCATCAGAGCTTGAAAATGAGCAGCTTTATTGTGATAATAACATGGTGAATGAGGAGATGAAGGTTAATACAATTGAGAACAACAAACATGAAGGGTCAAAGAGAAAAGAGAAGCAAAGCCATGAGTGTGCGGATATTTGGGTAGAAATTTGTAGGCTAGTTGATGATGAATTGGGATCAAATAAGTTTGATGAAGGTTTGAGGAAACAAGGTAATTTTGAAAGTGTATGTGTAGATTTTGAGTCTGAAATTTTTGATCATTTGTTATATGAGGTCATAGATCAACTTGTTGGGAAAGCATTGTGA 1239 0.4068 MNLLTPSSSSTLTLDPSKGATAGYLTTIFRRILCSGGLPTHPLDQISERDSKSKMSGKVQEFKPKQSTQSTTTSTITPGIVERLMGLEPMGERETKTSIEATPSSSLSRSKSMNSVVEHLGECKRMEGLHKHAKSSSFHEVSTFYLHENENFLVLSFKSGCDDGVEFRSKGRKKEKGLKERGEFKKNKRENVHDEKVNLSDMSSANVGNDGCQHKLQFANTSPLFMGLFEKENVDSETKRFSHSMKSKEVTNGAKVKRRKKGTTCYAEKKVDTECNSEEDSSPVSIFDFERQTPRTEVDSFGVDTSWRRKLSSELENEQLYCDNNMVNEEMKVNTIENNKHEGSKRKEKQSHECADIWVEICRLVDDELGSNKFDEGLRKQGNFESVCVDFESEIFDHLLYEVIDQLVGKAL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01262 412 MobiDBLite consensus disorder prediction 172 194 - -
Cca05g01262 412 PANTHER - 11 412 - -
Cca05g01262 412 PANTHER OS05G0128300 PROTEIN 11 412 - -
Cca05g01262 412 MobiDBLite consensus disorder prediction 45 59 - -
Cca05g01262 412 MobiDBLite consensus disorder prediction 39 113 - -
Cca05g01262 412 MobiDBLite consensus disorder prediction 60 79 - -
Cca05g01262 412 MobiDBLite consensus disorder prediction 97 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01262 Cca-Chr5 30313130 30315464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01262 17 407 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 27.885 1.16e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01262 - - gmx:102660974 528.865