Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01245 ATGCAAATGGAGACTCTTCCTCTCATCTTCACCCTAACAGCATTGCTCTCAGCCTACTTCCTTTGGTTCCAGTTCCTCGCCAAAACCCTAACCGGCCCAAAACCATGGCCCTTGGTGGGGAGCCTCCCGGCCCTCATCAACAACCGCCACCGCGTCCACGACTGGATAGCCGGAAACCTCGGTGCCGCGGGTGCCTCCGCCACCTACCAAACATGCATCATCCCCTTCCCCTTCCTTGCTCGCAAGCAAGGGTTCTACACCGTCACGTGCCACCCCAAGAACCTCGAGCACATCCTCCGGGCCCGGTTCGACAACTACCCGAAAGGGCCCAAGTGGCAGGAGGCTTTCCACGAGCTGTTGGGCGAGGGCATCTTCAACAGCGATGGGGACACGTGGCTCATGCAGCGCAAAACCGCGGCCCTTGAGTTCACTACACGGACTTTGAAACAGGGCATGTCTCGTTGGGTTAACAGGTCCATTAAGAACCGTTTGTGGTGTATAATGGATAAAGCCACCAAAGATCATGTCTCCGTGGATTTGCAAGACCTTCTTCTGCGCTTGACGTTTGATAACATTTGTGGACTTACTTTCGGGAAAGATCCTGAAACGCTTTCTCCTCAGCTTCCCGAAAACCCTTTCGCTGTTGCTTTTGACACTGCCACTGAAGCCACCATGCACAGGTTACTTTATCCAGGTATGGTGTGGAGGTTCCAGAAGCTTCTCAGCATTGGATTCGAAAAGAGGCTGAAGGAGAGTCTCCGAATCGTGGAAGCTTACATGAACGACGCCGTTGCAGACCGCAAGGAAACTCCCTCTGACGACTTGCTCTCTCGCTTCATGAAGAAGTGCGACGCCGCCGGAAATCCCTTCTCCGCCGCAGCACTCCAGCGCATCATCCTCAACTTCGTCCTCGCCGGCAGGGACACCTCATCGGTCGCTCTCACCTGGTTCTTCTGGCTCCTCATCAACCACCCACGCGTAGAGAAAAAAATACTCAACGAAATCGCCACCGTCCTCACCGACACGCGCGGCAGAGACAGACGCCGGTGGACAGAGGACCCCCTCGACTTCGCCGAAGCGGACCGGCTCATGTACCTGAAAGCTGCGCTGGCCGAAACGCTGCGTTTGTACCCGTCGGTTCCGCAGGACTTCAAGCAGGCCGTCGCCGACGACGTGTTGCCGGATGGAACGGTGGTGCCGGCGGGATCAACGGTGACATACTCGATATACTCTGCAGGGAGGGTGGAGACAGTGTGGGGAAAGGATTGCTTGGAGTTTAAACCGGAGAGGTGGCTTTCGGTTCGCGGTGACCGGTTCGAACCGCCGAAAGATGGGTTCATGTTCGTGGCGTTTAATGCGGGACCGAGAACTTGTTTGGGCAAGGACTTGGCTTACTTGCAAATGAAATCAGTGGCTGCTGCTGTGTTGCTGCGTTACCGGCTATCGCTGGTTCCCGGTCACCGAGTGGAGCAGAAGATGTCTCTTACTTTGTTCATGAAGAATGGACTGAAGGTGTTCTTGCATCCACGTGAACTTCGATGTGAGACAGGGAATGCCACGTCACTGTAA 1569 0.5545 MQMETLPLIFTLTALLSAYFLWFQFLAKTLTGPKPWPLVGSLPALINNRHRVHDWIAGNLGAAGASATYQTCIIPFPFLARKQGFYTVTCHPKNLEHILRARFDNYPKGPKWQEAFHELLGEGIFNSDGDTWLMQRKTAALEFTTRTLKQGMSRWVNRSIKNRLWCIMDKATKDHVSVDLQDLLLRLTFDNICGLTFGKDPETLSPQLPENPFAVAFDTATEATMHRLLYPGMVWRFQKLLSIGFEKRLKESLRIVEAYMNDAVADRKETPSDDLLSRFMKKCDAAGNPFSAAALQRIILNFVLAGRDTSSVALTWFFWLLINHPRVEKKILNEIATVLTDTRGRDRRRWTEDPLDFAEADRLMYLKAALAETLRLYPSVPQDFKQAVADDVLPDGTVVPAGSTVTYSIYSAGRVETVWGKDCLEFKPERWLSVRGDRFEPPKDGFMFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLSLVPGHRVEQKMSLTLFMKNGLKVFLHPRELRCETGNATSL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01245 522 PANTHER CYTOCHROME P450 5 512 - -
Cca05g01245 522 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 SUPERFAMILY Cytochrome P450 21 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Cca05g01245 522 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 5 512 - -
Cca05g01245 522 Gene3D Cytochrome P450 26 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01245 522 Pfam Cytochrome P450 75 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01245 Cca-Chr5 30028747 30031960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01245 3 510 Cytochrome P450 AT5G58860 72.353 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01245 K15401 - gmx:100788343 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01245 05 30028747 30031960 Cca05g01245 05 30028747 30031960 ECH