Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01240 ATGGGTTTGAATTTAAGGGACATTCAACTTCGTTTTTCAAGAATGATTCATGTTTCAGTTGAGATTAGCTACACTTTTATTCGAAGGCATCCACGAGTTTCGGGTGCTTTGTTGGTCTTCTTCATTTTGTATATATTTCTTTCTTATATTTACAATTTGTTGGCCTTCTTGTCCCCATTTTTTGTGTGCATTGCCATTTTTGTTAGAATCTTTTGGAGTTCTGAACAAAGCCACCTTAAAAGTGTCAACAAGGAGGAGAAAAAAGAAGAGAAGAAAAAAGTTGAATCAAAACTTCTATCAAACGTGGTAAAGAATGAAAGACGTGGACTACTTTACAAGTGCCCATCACACAATGCAACAAGTAGAAGAAGAAATTTCACTGGGAAGAAATTGGATGTGTATGGTGGTATAGAAATAAAAGCCAAAGATTTATCTTCAGTGTTTCGTAATGAATTCACTAGACTTAATAACGACATTAGAAGGAATAGATTTTATAAGGAAGAGGTTGGTTCTTTGGAGGATCCTACAAAGCAAGCATTATTTTCTGAACCTTCAATGTTGAACTTTGTGACTTGTGGTGTTGGTTTAGAGAAAAAGGCAAAAAACAAAGAGGATGAGAAAAAAGCACAAGAGGATGGCAATAAAGGTGTAGAATTGACAGATGATGATCAGAAAAATGAGATGGATCTTGGGACATGTGAGTTGGAGAGACATAAAAGGCTAGAGAGTCTTATAGCCAGAAGAAGAGCAAGAAAGCAATTAAAGTTGCAGATTGAGAATGGTCTAATTGATATGAAATCAGTTATCCCAAGCCAAATTGCTCCACTATTTATTACAAGACTCAATCCATTTGATTCTCCAAGAGGGTTTGATGGCATAGAAATGCCTGGTTCTGCACCATCTGCTTTGAGAAGCCCATTTGATATTCCCTACGATCCTTTTGAGGAGAAACCCAATCTCACTGGGGACAGTTTTGATCAAGAATTGAAGAATTTGTTAATAGAACCTAGACGAGAAGATCTTCAAGCCAGAGAATCTAGGTTGGCACACTCAAGAGTTAGAAGGCTTGAAGGTAAAGGAAATGATGACAAGCTTGAACAACCAATATCCAAAGAAGACAGTGAAAATGAATCAAAACCTTCTATTCCATCAAGTGAAGAAGAGGAAACAACACATGAAGAGGATAAGAAATGTGAAATTGATAACATAGCTGACATCACAGGTGAGGAAGTGGACAATGTTCAAGCAACAAAATCCAATTCAGACCACACAAGTGAGTCAAACTTAATTCCAATGATCAATGTTGAAAGATCTGAAGTTTCAGAGAAACTAGAATTACCAAGAGTTCCTAAGCCTCAAGTAGGGGGTCTCAATTTACCAATATCAAGTACTTGTGCTACTAAAATAAATGATTCTCTGTATGAATCTTTTTCACCTCCTATTATTAAGAACCAAGAAAATATGTTAATTGGTGACCCAACCTCTCACAAACCTTCATGCTCTTTAGCTTCTGACTTACAAGTGGAGGTTTCTGAGGTTGGTTCACCAACACTAACAGTTGATGAGAACCATGAGGTTGCTACAACCACAGATGGAGAATCCATAATATATGATGGAGACATTGATAAAGATGTTACTTCTGGTAGTGAAGACATGTGGGGAGCCTCACTCCATTTAAGAGAAGTACGTAGAGTAAGTGAGCAAGATATTTCAGAAATAAACAACTGGAGGGACATTTCTTCACCCCTTTCTTTACAAAACATAGATGAAGAAAATGTAGCTGATGACTCTATGTCCTCAAGATCAGACATTCCCGATGATACTCCAACCTATGTAATGAATAGTGACCATAACAACATATTTGGTAATACAAAAGATTTTTTAACAGAAAATGGTGCACCCCGACCTTCTCATTCTCCAGTTGTATCATCACGTTGGAAGCGATTGATGGATAATCGTGTTAATCGTTCACTTCATGAAAAGAATTCAAAAAAACCCATAGAATTGTTAAACATCTCAGAGAATTCAAGTAAGTCACAAGTTATTAATGATGGGAACAACTCAACAGTCTCTGAGCAAGTTAACACACATAACTCAAGAGGTGATGGAGAACTTGGTATATCAGATTCAATTATGCAACAAGAAGCAACTGATGAAGTCTCAAACAACTCAAGTTCATCATCTTCACCAAGGTCTGTATTGTCAATAGCACCAAAGACCACAACTGACCAAGTTTCCATGCCAACTTTCAATAAAGAGACGCACCTAGATGTTCAACAGTCCAACATGCAGGAAATAAAACAAGAAATATTAAATGAAGGTCCCCTTGACCCCATCCCTCAAAATATTCAACCTTCCATAGATGACCCAAATGTTGAATCACGTAGTAATGACATGATTCATCCTCAGGAACAAACTTGTCCACCGGAGAACTTCATTCAAGAATCAAATATATCTACCAAGATGAATGATGTAGGAGTTTGTAACAAGGAAGATGAAAATAAGTTAAAGAATGATGAGACTAATGGAGACAAATTTACTCCAAAAGTTAGTCAAGATGCTTCAATTGAACCTTTTAGACCATCAGAGAGGATGACTTCAAAGGATATAAGTGAGAAATCAAGAGAAGAATTTGATGAAAAAGTGCCATTGATTTCTCTAATACTAGAATCATCCTCGGAAATTCAAGAAGAGAATGAAGAAAACTCACCAGAAGAGGCAACCATGAAACCATGTATTAATACTGAAGTAACAGACACAAGTTCTGATGAAGATTTTGAAGGAAAACGCAATAACTTGAATGAAAATGAAGCCATGCTCTCATCATGTTTATCGGCGGGAGACACTAACAAGTTGAAAGAAATAGACAAGCCAAAACATAGTTCGGAAGAGGGGAATTATTTGCAAAATGAGTCAAAGCAAGTAGGTGAAAATCATATGGACAAGGAAAAAGTGGAGGAAGATGATATCTCTAAAGACTCTCCACTACCAATTACCACTGCAGCAACCAACTTTAAAGACCAAGAAGGAAAATGTGAGAAGATGAACAAGAATGAAGCCACTAACCAAGAATTAAACAAGAACGAAATCATTGCTAAATCTGAACCTGTTGAAGAAACTGATCTGGAAACAAACATAAACAAGTTGAGAGAAACAGACAAGGCAAAGCATAGTTCAGAAGAAGTTAATTATTTGCAAAGTGAGTCAAAACATGTGGTTGAAGATCATATGGAGAAGGAAAAGTTGGTTACAGATAATATCTCTGAAGACTCTCCACTACCAATTACCACTGAAGTAACCAATTTTGAAGACAAAGAAGGAGAATGTGAGAAAATGAACAACAATGAAGCCATTGACCACAAATTAAACAACAATGAAGTCATTGTTATATCTGAACCCACAAAAGAAATTAATGAGATAACAAATATAGCACACATGAAAGACCTTGAAGAAAAGACTTCAACTTGA 3468 0.3636 MGLNLRDIQLRFSRMIHVSVEISYTFIRRHPRVSGALLVFFILYIFLSYIYNLLAFLSPFFVCIAIFVRIFWSSEQSHLKSVNKEEKKEEKKKVESKLLSNVVKNERRGLLYKCPSHNATSRRRNFTGKKLDVYGGIEIKAKDLSSVFRNEFTRLNNDIRRNRFYKEEVGSLEDPTKQALFSEPSMLNFVTCGVGLEKKAKNKEDEKKAQEDGNKGVELTDDDQKNEMDLGTCELERHKRLESLIARRRARKQLKLQIENGLIDMKSVIPSQIAPLFITRLNPFDSPRGFDGIEMPGSAPSALRSPFDIPYDPFEEKPNLTGDSFDQELKNLLIEPRREDLQARESRLAHSRVRRLEGKGNDDKLEQPISKEDSENESKPSIPSSEEEETTHEEDKKCEIDNIADITGEEVDNVQATKSNSDHTSESNLIPMINVERSEVSEKLELPRVPKPQVGGLNLPISSTCATKINDSLYESFSPPIIKNQENMLIGDPTSHKPSCSLASDLQVEVSEVGSPTLTVDENHEVATTTDGESIIYDGDIDKDVTSGSEDMWGASLHLREVRRVSEQDISEINNWRDISSPLSLQNIDEENVADDSMSSRSDIPDDTPTYVMNSDHNNIFGNTKDFLTENGAPRPSHSPVVSSRWKRLMDNRVNRSLHEKNSKKPIELLNISENSSKSQVINDGNNSTVSEQVNTHNSRGDGELGISDSIMQQEATDEVSNNSSSSSSPRSVLSIAPKTTTDQVSMPTFNKETHLDVQQSNMQEIKQEILNEGPLDPIPQNIQPSIDDPNVESRSNDMIHPQEQTCPPENFIQESNISTKMNDVGVCNKEDENKLKNDETNGDKFTPKVSQDASIEPFRPSERMTSKDISEKSREEFDEKVPLISLILESSSEIQEENEENSPEEATMKPCINTEVTDTSSDEDFEGKRNNLNENEAMLSSCLSAGDTNKLKEIDKPKHSSEEGNYLQNESKQVGENHMDKEKVEEDDISKDSPLPITTAATNFKDQEGKCEKMNKNEATNQELNKNEIIAKSEPVEETDLETNINKLRETDKAKHSSEEVNYLQSESKHVVEDHMEKEKLVTDNISEDSPLPITTEVTNFEDKEGECEKMNNNEAIDHKLNNNEVIVISEPTKEINEITNIAHMKDLEEKTST 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01240 1155 MobiDBLite consensus disorder prediction 678 703 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 341 398 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 950 966 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 944 998 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 200 222 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 1018 1039 - -
Cca05g01240 1155 PANTHER DENTIN SIALOPHOSPHOPROTEIN 1025 1153 - -
Cca05g01240 1155 PANTHER DENTIN SIALOPHOSPHOPROTEIN 1 1040 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 834 855 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 623 645 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 710 743 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 975 993 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 678 743 - -
Cca05g01240 1155 PANTHER CARDIOMYOPATHY-ASSOCIATED PROTEIN 1025 1153 - -
Cca05g01240 1155 PANTHER CARDIOMYOPATHY-ASSOCIATED PROTEIN 1 1040 - -
Cca05g01240 1155 MobiDBLite consensus disorder prediction 289 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01240 Cca-Chr5 29975227 29980193 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01240 - - ccaj:109816274 2178.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01240 05 29975227 29980193 Cca05g01240 05 29975227 29980193 ECH
Cca01g00777 01 10308869 10311308 Cca05g01240 05 29975227 29980193 PCT