Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01182 ATGGAAGCACATCCAAACGCGGCCTCCATGCTGAGAAGCAGAACTATAATACCTCATCCTCCACCGTTGCTCGCCCTCACTTCGAGGCTGccgtcaccgtcaccgtcaccgtcaccgtcagtcaccgtcTCTGAATCCGCACTACCCTGTTCTCGGAACCCTAAACCCTCATTGCTCCGTTTTCCTCTCTTCTCGAATCCTCACACTCACACTCTTCAAAGCATGACGCTCTCCAACTGCTTCTCTCACTCCGGGCCCACCGTCCCCATTCCGGGTCaacccgaatccgaattcgaatccgattccgattccCCTCACACTCTCGTCGTGGTTTCCTTCTACAAGTTCGCGGATTTCCATGATCACGCCCTTCTACGAAGCCCCTTGAAGCAACTCTGTCAACGCTTGCGTGTTTCAGGTGGAATTATTCTTGCGCCTGAAGGGATCAATGGCAGCATATGTGGGACACGGGAATCGGTGGAGGAAGTTCTTGCCTTTGTGGAAAGTGATGATCGATTGAAGGGGCTAAGGCGGGTTGAGTCGCCTGTTAGTCCTGAGGAGGAGGCCATCCATCATGGGCATAGTGCCGCATCTCCTCTTGCTGCGGGGGAGGATGCACCCTTTCGATGGGACCATGTGAGGGTCAAGTTGAAGAAGGAGATTGTCACTCTTGGGATGCCTACCGTGTCACCTATTGAAAGGGTTGGAAAGTATGTTGGCCCAGAAGAGTGGAATTCTTTAATTAGTGATCCGGATACAGTGGTAATTGATGTTCGGAATAACTATGAAACCAGAATAGGAAAGTTTAAAGGAGCCGTTGATCCCTGTACTACGTCATTTCGTGAATTCCCATCTTGGGTGGAGGAGCATTTTCAGCTTGCAAAAACAGATGGTGATGAGCAGCCAAAAGTCAAGGAAAACAATTCCTTCCAAACTTCTGAAAAAGAAATGGAGAATCAAAAACAACATATGCCACGTGTTGCAATGTATTGCACTGGAGGTATTCGATGTGAGAAAGCTACAAGTCTACTTCTTAGCAAAGGTTTCAAAGAGGTTTTTCACCTGGAAGGTGGAATTCTAAAATATCTTGAGGAGGTTCCAGAGACAGAGAGCCTCTGGGAAGGAGAGTGCTTTGTTTTTGACAAACGAGTCTCTGTGGAGCATGGTTTGGTGCCAGGAAATTTCAAACTTTGCTATGGTTGTAAGCAGCCTGTGAGTGATGCTGACATGGAAGCCCCAGAATTTGAATATGGAGTCTCTTGTCCTCACTGTTTTTCACTGAAGTCAGATGAAGAAAAGGAGAGGGCTCGAGCTAGACAGAGGCAATTTGAGAGGTGGGGAATCATAGGTGGCCCTGATAAGGGTCGCCGGCCAACTCAAGAACCGGATAGTGCTAGTAGGAAACCAGACCAGCTTTCACGTTCTATTTAA 1431 0.4556 MEAHPNAASMLRSRTIIPHPPPLLALTSRLPSPSPSPSPSVTVSESALPCSRNPKPSLLRFPLFSNPHTHTLQSMTLSNCFSHSGPTVPIPGQPESEFESDSDSPHTLVVVSFYKFADFHDHALLRSPLKQLCQRLRVSGGIILAPEGINGSICGTRESVEEVLAFVESDDRLKGLRRVESPVSPEEEAIHHGHSAASPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKYVGPEEWNSLISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEEHFQLAKTDGDEQPKVKENNSFQTSEKEMENQKQHMPRVAMYCTGGIRCEKATSLLLSKGFKEVFHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVPGNFKLCYGCKQPVSDADMEAPEFEYGVSCPHCFSLKSDEEKERARARQRQFERWGIIGGPDKGRRPTQEPDSASRKPDQLSRSI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01182 476 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 103 456 - -
Cca05g01182 476 SMART rhod_4 239 368 IPR001763 -
Cca05g01182 476 Pfam UPF0176 acylphosphatase like domain 109 221 IPR040503 -
Cca05g01182 476 CDD RHOD_YceA 236 364 - -
Cca05g01182 476 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 218 397 IPR036873 -
Cca05g01182 476 MobiDBLite consensus disorder prediction 439 476 - -
Cca05g01182 476 Pfam Rhodanese-like domain 242 364 IPR001763 -
Cca05g01182 476 Hamap tRNA uridine(34) hydroxylase [trhO]. 106 408 IPR020936 -
Cca05g01182 476 MobiDBLite consensus disorder prediction 24 38 - -
Cca05g01182 476 ProSiteProfiles Rhodanese domain profile. 249 371 IPR001763 -
Cca05g01182 476 Gene3D - 223 404 IPR036873 -
Cca05g01182 476 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 103 456 IPR020936 -
Cca05g01182 476 MobiDBLite consensus disorder prediction 1 49 - -
Cca05g01182 476 MobiDBLite consensus disorder prediction 297 321 - -
Cca05g01182 476 Gene3D - 96 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01182 Cca-Chr5 29393003 29396949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01182 101 476 Sulfurtransferasese or Rhodanese AT2G40760 75.132 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01182 - - gmx:100784854 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01182 05 29393003 29396949 Cca05g01182 05 29393003 29396949 ECH