Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01179 ATGGATATTCAGCAAATAATATTAGAAGCAGAGCATCGATGGCTACGTCCGGTTGAAATTTGTGAAATTTTCAGCAATCGTAACAAGTTTCTACTTGCTCCAGAACCTGCATATATGCCACCAAGTGGTTCACTTTTCCTGTTTGATCGGATGGTGGTGAGATTCTTCAGAAAGGATGGCCATAACTGGAGGAAGAAAAAAGATGCAAGAACAGTCAGAGAAGTTCACGAGACACTAAAGGTTGGAAATGTCGATGTGTTGAGCTGCTACTGTGCCCATGGAGAAGAAAATGATAATTTTCAAAGACGCACGTATTGGATGCTTAAAGAAGAACTCTCTCATATTGTTCTCCTCCATTATCTGCAAGTGAAGGTCGAAAAGCAGCTGATGGCTGGTTCCAGCAACAATCCAACTTCTGGATATTTCAGAAGTGAGATATCGCAGAATGGGATAGATTTCTACAATAGGAATGATGAAAGATTGTATGAAGGATTAGATAATGAAAGCCTGAATTGGGAGGAGGTACTTAGCTATTATGAGCAATTCCATGATCATAGGAATGATGAAAGATTGCATGAAGGATCATATAATGAGATGCAGAATTGGGAGAATGATAGCTCATATAAGCAATTTCGAGGAAAACAGAAGATAAGTGATTCTGAATGTTCATGGTCCTTGTTAACTCTAAGTTCTGATGGAGACACAGATATAACATTGTCAAATTCACACGATTATTCTGGTTGCTCATAA 750 0.3867 MDIQQIILEAEHRWLRPVEICEIFSNRNKFLLAPEPAYMPPSGSLFLFDRMVVRFFRKDGHNWRKKKDARTVREVHETLKVGNVDVLSCYCAHGEENDNFQRRTYWMLKEELSHIVLLHYLQVKVEKQLMAGSSNNPTSGYFRSEISQNGIDFYNRNDERLYEGLDNESLNWEEVLSYYEQFHDHRNDERLHEGSYNEMQNWENDSSYKQFRGKQKISDSECSWSLLTLSSDGDTDITLSNSHDYSGCS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01179 249 ProSiteProfiles CG-1 DNA-binding domain profile. 3 129 IPR005559 GO:0003677
Cca05g01179 249 SMART CG_1_2 6 124 IPR005559 GO:0003677
Cca05g01179 249 Pfam CG-1 domain 9 122 IPR005559 GO:0003677
Cca05g01179 249 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 224 - -
Cca05g01179 249 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 2 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01179 Cca-Chr5 29359502 29362565 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01179 1 136 CAMTA Transcription Factor Family AT5G64220 63.971 9.59e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01179 K21596 - ccaj:109795181 524.242