Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01111 ATGATGTGGGAATGGGACGAATACGAAGACGCAATCCCCAGACACGAACAGccccaacccgaatccgatcccgagcccaattcctatctcaatttcgatTTCTTCTCTGCTATCTCCAAACCCAAGGATTATTATAAGATACTGGAAGTGGATTATGATGCTACGGACGACGCTATTCGTTCCAATTACATTCGTCTCGCTCtgAAGTGGCACCCGGACAAGCAGAAAGACCAGGATTCTGCAACCTCGCGATTCCAAGAGATAAACGAGGCATATCAGGTTTTGAGTGATCCAGTCAAAAGGAGGGAATATGACATAAATGGGATGCGTTACGTATATGATTATAATATCATTGATTATCTTAACCGTTACAAGGGCCTTATATTGACGTGCAATGGGCTTGGCATAAAGCATTCGATTTGGTAA 426 0.3779 MMWEWDEYEDAIPRHEQPQPESDPEPNSYLNFDFFSAISKPKDYYKILEVDYDATDDAIRSNYIRLALKWHPDKQKDQDSATSRFQEINEAYQVLSDPVKRREYDINGMRYVYDYNIIDYLNRYKGLILTCNGLGIKHSIW 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01111 141 Gene3D DnaJ domain 35 119 IPR036869 -
Cca05g01111 141 PRINTS DnaJ domain signature 45 63 IPR001623 -
Cca05g01111 141 PRINTS DnaJ domain signature 63 78 IPR001623 -
Cca05g01111 141 PRINTS DnaJ domain signature 80 100 IPR001623 -
Cca05g01111 141 Pfam DnaJ domain 43 105 IPR001623 -
Cca05g01111 141 CDD DnaJ 43 97 IPR001623 -
Cca05g01111 141 ProSiteProfiles dnaJ domain profile. 43 108 IPR001623 -
Cca05g01111 141 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 141 - -
Cca05g01111 141 SUPERFAMILY Chaperone J-domain 38 127 IPR036869 -
Cca05g01111 141 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 141 - -
Cca05g01111 141 ProSitePatterns Nt-dnaJ domain signature. 85 104 IPR018253 -
Cca05g01111 141 SMART dnaj_3 42 100 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01111 Cca-Chr5 28345474 28349182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01111 36 105 C2H2 Transcription Factor Family AT1G74250 42.667 4.35e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01111 - - gmx:100804409 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01111 05 28345474 28349182 Cca05g01111 05 28345474 28349182 ECH