Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01075 ATGGCCAGCGCTCCCTCCCCACGCGAAGAGTTCGTGTACATGGCGAAGCTGGCGGAGCAAGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTCTCCGCCGCCGTCGAGAACGAGGAGCTCACCGTCGAGGAGAGGAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGCGCCAGGCGCGCCTCCTGGCGCATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCAGAGGCAACGAGGACCACGTCGCCGTCATCCGCGACTACCGATCCAAGATCGAGGCTGAGCTTTCCAACATCTGCGACGGAATCCTCAAGCTCCTCGACTCGCGCCTCGTTCCCTCCGCCGCTGCTGGCGACTCCAAGGTCTTCTACCTCAAGATGAAGGGCGACTACCACAGGTACCTCGCCGAGTTCAAGACTGGCGCCGACCGCAAGGAGGCCGCTGAGAGCACGCTCTCCGCCTACAAATCTGCTCAGGACATTGCAAATACCGAGCTGCCTCCAACTCACCCTATCAGGCTGGGTCTTGCTCTGAACTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGACCGGGCGTGCAGTCTTGCAAAACAGGCCTTTGATGAGGCGATTGCTGAATTGGATACACTGGGAGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTTACCCTCTGGACCTCTGACATGCAGGATGATGGTGCAGATGAAATTAAAGAAGCCGCACCTAAAGGTGACGGGGAACAAAATTAA 786 0.5623 MASAPSPREEFVYMAKLAEQAERYEEMVEFMEKVSAAVENEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIEAELSNICDGILKLLDSRLVPSAAAGDSKVFYLKMKGDYHRYLAEFKTGADRKEAAESTLSAYKSAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKGDGEQN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01075 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cca05g01075 261 Gene3D - 2 251 IPR036815 -
Cca05g01075 261 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 254 - -
Cca05g01075 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cca05g01075 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Cca05g01075 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cca05g01075 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cca05g01075 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cca05g01075 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cca05g01075 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cca05g01075 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cca05g01075 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cca05g01075 261 Coils Coil 14 41 - -
Cca05g01075 261 PANTHER 14-3-3 PROTEIN 5 254 IPR000308 -
Cca05g01075 261 PIRSF 14-3-3 2 250 IPR000308 -
Cca05g01075 261 SMART 1433_4 8 251 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01075 Cca-Chr5 27674277 27676947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01075 6 261 14-3-3 family AT1G78300 89.494 3.81e-170 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01075 K06630 - gmx:100794129 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01075 05 27674277 27676947 Cca05g01075 05 27674277 27676947 ECH