Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01051 ATGCGTGAGGCTGAGTTTGGACTTGATGGATCAGTATCAGGTAAGGAGACCTCCTGTGAAGCTCCATCATGGATGCCTCGGTCACGCAAAATTGAGAGGCCATATGTGTGTGCTGTTGAGGATTGTCAATCAAGTTACCGAAGGAAAGACCATCTGACTCGTCATCTTTTACGACAACAAGGGAAGGCTTTGCCCATTTGA 201 0.4726 MREAEFGLDGSVSGKETSCEAPSWMPRSRKIERPYVCAVEDCQSSYRRKDHLTRHLLRQQGKALPI 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01051 66 MobiDBLite consensus disorder prediction 1 24 - -
Cca05g01051 66 SUPERFAMILY beta-beta-alpha zinc fingers 32 59 IPR036236 -
Cca05g01051 66 Gene3D Classic Zinc Finger 10 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01051 Cca-Chr5 27240538 27240838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01051 32 62 C2H2 Transcription Factor Family AT1G72050 64.516 6.66e-09 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Cca05g01051 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01051 K09191 - fve:101303637 75.0997