Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01046 ATGGCTCTGACCTCTACCGAGACGACTCCGCCGCGCTTGTCCTCAAATTCGTCGCCTTCGCCTCCATCCTCCTCCCCGGCATGGCCGGAATCTCCATCCTTCTCGTCGGACGCCACCGCCGCTTCCTCCGCATCGACGGCAACCTCTTCAATACTCAAGTGGGTCACCCAAGATGAAGATGAGCTTAAAGAAACCACCAAGGGTCGAGTCCAAGCAGTAATTCTTGACATGACAAACTTGATGAATGTTGATACTTCCGGAATTCTAGCTCTTGAGGAACTGCACAAGAGGTTGCTTTCACGTGGTGTAGAAGTAAGGCTACTCTGA 327 0.526 MALTSTETTPPRLSSNSSPSPPSSSPAWPESPSFSSDATAASSASTATSSILKWVTQDEDELKETTKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGVEVRLL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01046 108 CDD STAS_SulP_like_sulfate_transporter 59 107 - -
Cca05g01046 108 ProSiteProfiles STAS domain profile. 43 108 IPR002645 -
Cca05g01046 108 MobiDBLite consensus disorder prediction 1 21 - -
Cca05g01046 108 PANTHER SLC26A/SULP TRANSPORTER-RELATED 39 105 - -
Cca05g01046 108 MobiDBLite consensus disorder prediction 29 50 - -
Cca05g01046 108 SUPERFAMILY SpoIIaa-like 63 107 IPR036513 -
Cca05g01046 108 Pfam STAS domain 43 107 IPR002645 -
Cca05g01046 108 MobiDBLite consensus disorder prediction 1 50 - -
Cca05g01046 108 Gene3D STAS domain 40 108 IPR036513 -
Cca05g01046 108 PANTHER SULFATE TRANSPORTER 39 105 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01046 Cca-Chr5 27153049 27155138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01046 42 105 Inorganic Solute Cotransporters AT5G10180 43.939 1.75e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01046 K17469 - ccaj:114915106 114.005