Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01038 ATGGGCTCCGTAGGTAATGAGCCAAGGTTTGGCAGGCTAGGTTCAATGGATGAAGGAATTGGGTCAACAAAAAGATTGCCATGTAAAGGATTATTTTTAACAAAAGGAAAATTCATTTTTATCAAAAAAGACTTGTCTTCTACCGTGTATGGTTCATTCTCCCAAGGAACAAGTTCAAATGTTGATCCACGAGGCATGGGAGAGTGCCACGTGTCAAATCCAAGCGATGGGAACCTTCAAGCATGGCCTCAAGGGTACACCTTGTATCCTCacatgcagcatgacatggtgggacctgacatgccagacatgaTGCCACATGGGCAAGTGAACATCCCAATCACTGCCTCACACGTGGAACCACCCAAAAATGAACATGTAGAATATGACCAATCTAAGCAACCTCATCATCAACATCAACATCAACTTAATGCTCAATGA 441 0.3855 MGSVGNEPRFGRLGSMDEGIGSTKRLPCKGLFLTKGKFIFIKKDLSSTVYGSFSQGTSSNVDPRGMGECHVSNPSDGNLQAWPQGYTLYPHMQHDMVGPDMPDMMPHGQVNIPITASHVEPPKNEHVEYDQSKQPHHQHQHQLNAQ 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01038 146 MobiDBLite consensus disorder prediction 124 146 - -
Cca05g01038 146 MobiDBLite consensus disorder prediction 51 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01038 Cca-Chr5 27011496 27011936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01038 43 116 Type I MADS-box Gene Family AT1G22130 40.000 6.09e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01038 - - pvu:PHAVU_008G170400g 160.614