Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01037 ATGAAGTTGAAAATCCAAGGCTATAGCCCCAAAGCCAAAGCTGCAGCCTCGAAGCAAAAAGAGTCCAGAAATTTAGAGCTACGACCCCCATTCCAGAGCTACAACCTTGGAGCTTTGGACTTGTCTTCTACCGTGTATGGTTCATTCTCCCAAGGAACAAGTTCAAATGTTGATCCACGAGGCATGGGAGAGTGCCACGTGTCAAATCCAAGCGATGGGAACCTTCAAGCATGGCCTCAAGGGTACACCTTGTATCCTCacatgcagcatgacatggtgggacctgacatgccagacatgaTGCCACATGGGCAAGTGAACATCCCAATCACTGCCTCACACGTGGAACCACCCAAAAATGAACATGTAGAATATGACCAATCTAAGCAACCTCATCATCAACATCAACATCAACTTAATGCTCAATGA 429 0.4172 MKLKIQGYSPKAKAAASKQKESRNLELRPPFQSYNLGALDLSSTVYGSFSQGTSSNVDPRGMGECHVSNPSDGNLQAWPQGYTLYPHMQHDMVGPDMPDMMPHGQVNIPITASHVEPPKNEHVEYDQSKQPHHQHQHQLNAQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01037 142 MobiDBLite consensus disorder prediction 115 142 - -
Cca05g01037 142 MobiDBLite consensus disorder prediction 48 73 - -
Cca05g01037 142 MobiDBLite consensus disorder prediction 1 23 - -
Cca05g01037 142 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01037 Cca-Chr5 27005934 27008382 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01037 40 112 Type I MADS-box Gene Family AT1G22130 40.506 1.82e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01037 - - pvu:PHAVU_008G170400g 159.844