Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01029 ATGAAGAAGGTCACAAGTATTGTTTCAATCTTCGTCATCCTGATACTTTCTTTTCAACACGTTTCTTCGTCACCTTTCTTATACGCAAGCCAGGTCCATGTGGAATCTTCTGGTGGAAGAAATGTTAAACAAGAACAAGAACATGCTCAAGAAGTGCGTTGCTCCAGGGAGAGAAGTAGGGCAGCTCGGAAAGTGATAGAGGAGTATTTGACACCATTTGTGGAAAGAGAAAAATACAAGCTTTCGAGTAAGTGCCAACTTCACCCTGAAAATGATATATTCGGTGATCAGGAAGAGCATAAACTTTTCATAGATAGACATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTTCGGGCAGAAAAATTTCTCGATCAGCATTTTGATAACAGGCACTACAATCTTCTGAATCTAAGTCATGGTAAGTGCTTGGCTGATTTATGTGGAGCGTTGCATTGTGATGCTGCTATGAATTTCAAGTCCTCTAGAAGCAAGTGCAATCCGGCAGCTTCTGCAAGAAACCGATACCTATGTGAGAGTCTTGCTGACAATTGTTTTCCTATTAGTGAGGGTCCATCAGCAGGCCGCCTTCATGAATTGTTTCTGCATCAATTTTGTGATGCTCACACCTGCTCAGGGAAACACAAGCCATTCTCTAGAGGAGGCAAGGATCAAAGTAGTTTCTTACGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGATACAAAGGTACTGCTTCTATATTTTTAAACGTGATTTAAAAAATCAAGGTTTTACACCCATATTTCGTGATGCTATTTCGCAAGTTGTAGTGATGTGA 849 0.4075 MKKVTSIVSIFVILILSFQHVSSSPFLYASQVHVESSGGRNVKQEQEHAQEVRCSRERSRAARKVIEEYLTPFVEREKYKLSSKCQLHPENDIFGDQEEHKLFIDRHEWRCGYCKKSFRAEKFLDQHFDNRHYNLLNLSHGKCLADLCGALHCDAAMNFKSSRSKCNPAASARNRYLCESLADNCFPISEGPSAGRLHELFLHQFCDAHTCSGKHKPFSRGGKDQSSFLRLAAGALILVLLPVFYLFLYLIQRYCFYIFKRDLKNQGFTPIFRDAISQVVVM 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01029 282 ProSitePatterns Zinc finger C2H2 type domain signature. 111 132 IPR013087 -
Cca05g01029 282 PANTHER ZINC FINGER PROTEIN-RELATED 5 253 - -
Cca05g01029 282 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01029 Cca-Chr5 26810778 26819875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01029 29 253 C2H2 Transcription Factor Family AT5G63280 60.793 1.57e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Cca05g01029 None None None