Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01023 ATGGCCATTGCATCGGCGGGGTTTGGTTTAGCTGAAGCATACGTGACGCGAAAGATATACATGGATAAAATGAAGAAAAGAGCACAAGAAGAAGAGGGAGACAAAAACACAGACACCGAGATTTCTACAATCGAAACGGGTTCCGAGGACAAAGCATCAAGTGGGTGTTTCTCATGGGTCTCCAAGCAGCACCACAAGAAAAATTCTCGAAGTGTTCTTGATGGTTACAATGGGACCGTGATGGCTTATGGTCAAACTGGAACTGGGAAAACTTTTACCCTTGGACGACTAGGGGATGGTGATGCCTCTGATCGTGGTATCATGGTTCGTTCCATGGAGGATATTTTTGCCGACTTATCTCCAGATACTGATTTTGTCACAGTCTCGTCAAGCTTGCTGTTGGTGATTGTAGTGGAAAGGATAGTGAACCGGGTCCTTTAA 441 0.4535 MAIASAGFGLAEAYVTRKIYMDKMKKRAQEEEGDKNTDTEISTIETGSEDKASSGCFSWVSKQHHKKNSRSVLDGYNGTVMAYGQTGTGKTFTLGRLGDGDASDRGIMVRSMEDIFADLSPDTDFVTVSSSLLLVIVVERIVNRVL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01023 146 MobiDBLite consensus disorder prediction 26 54 - -
Cca05g01023 146 Pfam Kinesin motor domain 60 123 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca05g01023 146 MobiDBLite consensus disorder prediction 40 54 - -
Cca05g01023 146 Gene3D Kinesin motor domain 12 142 IPR036961 -
Cca05g01023 146 PANTHER KINESIN-LIKE PROTEIN 70 136 IPR033291 GO:0008017|GO:0032886|GO:0048364
Cca05g01023 146 ProSiteProfiles Kinesin motor domain profile. 71 146 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca05g01023 146 PANTHER KINESIN-RELATED 70 136 IPR027640 GO:0003777|GO:0007018
Cca05g01023 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 123 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01023 Cca-Chr5 26710985 26712679 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01023 70 123 Calmodulin-binding Proteins AT5G65930 42.593 1.01e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01023 - K10396 gmx:112998750 111.309