Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01018 ATGGTTTCTCCTAATAGAGCACAGTATCCACCTATGGTCCGACAAGGCTCTTTGTATAACCTCACATTTGATGAGGTTCAGAGCCAGTTGGGAAACACAGGGAAGTCTCTCCATAGTTTGAATTTGGATGAGATTCATAAAACTGTGATCTCAGCTGAAAGTGGACAACTGGTGCAAGACCCTTCATCGGATCATTCATTTATTCTTGGAAACATTGACTTGAATGGAACAATAAGCAACAAAACCGATATTGGCGAGGCTTGGAGGGGAATGGTTCAACAACAGCACGTGAACAGGTCCATGGACACCCACATGCAGCAACCAAATTTGGGTGAAACCCTAGAAAGTTTCCTAGCTCGTGCAGGTATGCTTGATGTAGGAGACCACGACAATGTTAATGTTATTGATGATGCTCAACCCGTGATGGGAATTGATCCAATGGTGATGCCTTCACAGCATGAACATTGGTTACAAATGCAAATTCCTGGcattaacatccaccaacatcaccatcgggagcaacaacatcaacaAATAATTGGGTCGTGTCCGGATTTCAATGTTTCCAAGACATTTTATGAGAACCCAGTTATGGAAATGGGTTACTCAGAAAATTCAGTGGGGATTTCAATGTCACCTGCGTATTCAGATTCCAAGAGTGCTGTGTTTGGGAAGAATAGGTATTCAGATGAGGTGATGGAAAAGACTATTGAGAGGAGGCAGAAGAGAATGGCAAAGAACAGAGAATCTGCTGCAAGATCAAGGGCAAAGAAGCAGGAGCACGTTAATAAGTTAGAGAGAGAGAAGTTTCGCTTGCAGAAGATGAATAGCTCACTCAAAAAGCTAAAGGAATTGGATGCAGAGTTATTTTCAGCTACAACTCTCACTCCAAGATACCAACTACGGCGTACGAGCTCAACCACATTTTAA 930 0.4054 MVSPNRAQYPPMVRQGSLYNLTFDEVQSQLGNTGKSLHSLNLDEIHKTVISAESGQLVQDPSSDHSFILGNIDLNGTISNKTDIGEAWRGMVQQQHVNRSMDTHMQQPNLGETLESFLARAGMLDVGDHDNVNVIDDAQPVMGIDPMVMPSQHEHWLQMQIPGINIHQHHHREQQHQQIIGSCPDFNVSKTFYENPVMEMGYSENSVGISMSPAYSDSKSAVFGKNRYSDEVMEKTIERRQKRMAKNRESAARSRAKKQEHVNKLEREKFRLQKMNSSLKKLKELDAELFSATTLTPRYQLRRTSSTTF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01018 309 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 242 257 IPR004827 GO:0003700|GO:0006355
Cca05g01018 309 SUPERFAMILY Leucine zipper domain 239 281 IPR046347 GO:0003700|GO:0006355
Cca05g01018 309 Pfam bZIP transcription factor 239 282 IPR004827 GO:0003700|GO:0006355
Cca05g01018 309 MobiDBLite consensus disorder prediction 242 262 - -
Cca05g01018 309 PANTHER TRANSCRIPTION FACTOR BZIP FAMILY-RELATED 8 259 - -
Cca05g01018 309 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 8 259 IPR043452 GO:0003700|GO:0045893
Cca05g01018 309 CDD bZIP_plant_BZIP46 239 293 - -
Cca05g01018 309 Gene3D - 237 289 - -
Cca05g01018 309 SMART brlzneu 235 298 IPR004827 GO:0003700|GO:0006355
Cca05g01018 309 Coils Coil 248 285 - -
Cca05g01018 309 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 237 281 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01018 Cca-Chr5 26598244 26602823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01018 14 309 bZIP Transcription Factor Family AT3G56850 36.538 9.93e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca05g01018 bZIP_1 2.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01018 K14432 - gmx:100808654 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01018 05 26598244 26602823 Cca05g01018 05 26598244 26602823 ECH