Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g01017 | ATGAACTCTTCATCAACTCAACTAGTCCTGGTGAAAAGGATGGGTATATATGATCCATTCCATCAAGTGAACATGTGGGGGGACAGCTTTAAAATTGATGGCAGCCTGAATTCAATTGCTTCCCCAATGTTAATGATGAAGCCTAGCATGCAGAACAGGACTGATTGTACTCCTAATGAATCAAGGGAACCTTCTGGAGATGATCAAGAGTCTAATGACAAAGCTGATAGGAAGGCTCAAAGACGTCTAGCACAAAATCGCGAGGCTGCTCGGAAATGCCGGCTGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCCGTGTGAAGCTCATGCAATTGGAGCTGGAGATTGAGAAAGCAAGAAAGCAGGGTTTATACATACGCAGTGCAGTAGATGTCAGTTACATGGGATCATCTGGAACAATAAACCCAGGGATAACTTTGTTTGAACTTGAATATGGACATTGGATTGAAGAGCAAGACAGACGGAATGAAGAACTGAGAAATGCATTACAAACTCATGCATCTGAAATGCAGCTTCATCTTCTTGTTGCGAGTTGCTTGAGCCACTACTCAAATCTTTTCAGGATGAAAGCAGACGCTGCAAAGGCTGATGTCTTTTATTTAATCTCTGGTGCTTGGAAAGCCTCAGTGGAACGCCTTTTTCTTTGGATAGGAGGATCCCGTCCATCACAGCTTCTAAATATCATCGTACCTCAGCTTGAGCCTTTGACTGATCAACAAATTGTGAGCATTAACAACCTCCGGCTTTCATCTCAGCAAGCTGAAGATGCTCTTTCACTAGGATTGGACAAACTCCAGCAGAGTTTAGTCTTCAACATTCCATCAGATCCCTTGGTTGTAGGACACTATGGGTTTGAGATGGCTGCTGCCATGGACAAAGGTGAAGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGACAACAAACTCTGCTGCACATGTCTCGGATCCTGACAAATGGCCAAGCTGCTCAAGGCTTGCTGGCTATGGGGGAATACTTTCATCGTCTTCGCACTCTTAGTTCTTTATGGTCTGCTCGTTCATGTGATCCTTCCTTTCCCATTCATCATTCAAACTGA | 1110 | 0.4387 | MNSSSTQLVLVKRMGIYDPFHQVNMWGDSFKIDGSLNSIASPMLMMKPSMQNRTDCTPNESREPSGDDQESNDKADRKAQRRLAQNREAARKCRLRKKAYVQQLETSRVKLMQLELEIEKARKQGLYIRSAVDVSYMGSSGTINPGITLFELEYGHWIEEQDRRNEELRNALQTHASEMQLHLLVASCLSHYSNLFRMKADAAKADVFYLISGAWKASVERLFLWIGGSRPSQLLNIIVPQLEPLTDQQIVSINNLRLSSQQAEDALSLGLDKLQQSLVFNIPSDPLVVGHYGFEMAAAMDKGEALEGFVNQADHLRQQTLLHMSRILTNGQAAQGLLAMGEYFHRLRTLSSLWSARSCDPSFPIHHSN | 369 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g01017 | 369 | ProSiteProfiles | DOG1 domain profile. | 147 | 357 | IPR025422 | GO:0006351|GO:0043565 | |
Cca05g01017 | 369 | Coils | Coil | 97 | 124 | - | - | |
Cca05g01017 | 369 | Coils | Coil | 158 | 178 | - | - | |
Cca05g01017 | 369 | MobiDBLite | consensus disorder prediction | 60 | 89 | - | - | |
Cca05g01017 | 369 | PANTHER | FACTOR TGA7, PUTATIVE-RELATED | 14 | 361 | - | - | |
Cca05g01017 | 369 | SUPERFAMILY | Leucine zipper domain | 78 | 118 | IPR046347 | GO:0003700|GO:0006355 | |
Cca05g01017 | 369 | Gene3D | - | 77 | 129 | - | - | |
Cca05g01017 | 369 | MobiDBLite | consensus disorder prediction | 49 | 89 | - | - | |
Cca05g01017 | 369 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 76 | 111 | IPR004827 | GO:0003700|GO:0006355 | |
Cca05g01017 | 369 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 81 | 96 | IPR004827 | GO:0003700|GO:0006355 | |
Cca05g01017 | 369 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 14 | 361 | - | - | |
Cca05g01017 | 369 | Pfam | bZIP transcription factor | 76 | 112 | IPR004827 | GO:0003700|GO:0006355 | |
Cca05g01017 | 369 | SMART | brlzneu | 74 | 134 | IPR004827 | GO:0003700|GO:0006355 | |
Cca05g01017 | 369 | Pfam | Seed dormancy control | 166 | 239 | IPR025422 | GO:0006351|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g01017 | Cca-Chr5 | 26563349 | 26567525 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g01017 | 2 | 362 | Calmodulin-binding Proteins | AT1G77920 | 56.000 | 1.74e-143 | 409 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Cca05g01017 | DOG1 | 2.7e-27 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g01017 | K14431 | - | gmx:100775882 | 662.144 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca05g01017 | 05 | 26563349 | 26567525 | Cca05g01017 | 05 | 26563349 | 26567525 | ECH | |
Cca05g01017 | 05 | 26563349 | 26567525 | Cca03g01195 | 03 | 28498503 | 28503196 | PCT |