Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g00982 | ATGGAGAGAAAATTGCAATGGATTCTGGTTTTAGCAGTTTGTGCTTCATCACTCATTCATATTGTTGCAGAGAACAATGAAGGGGCTCACAGGAACCTTGCTAATATTGATTATTCAGGTGTTATAAGCATTGATTGTGGGGTAAACGAGGGCTACACTGACAAGACGACCAACTTACAATATGAAGCAGATGATATCCAATTTGGTGAAATTTATAACATATCCTCCATTTACAATTTTAACTATGTAACTCAGATTCAAAAGCAGCTCAACACATTGAGAAGTTTTCCTAATGGAAAAAGGAACTGCTATACTATGACTCCAAAACAGGGAAAGAACAAGAAGTATATTATCAGGGCTTACTTTGCATATGGAAACTATGACAACAAAAATAAACCACCAATTTTCGATTTATATATTGGTGTCAATATCTTCAAGACAATAAACTTCACTGAGGTTGATAAGGTTATCCGAATCGAAGCTATTCATTTTGCCTCAATAGACACAATAGATTTCTGTCTTGTAAACATCGACCAAGGGGTACCTTTCATTTCATTATTGGAACTGTGGCCTTTAGACAATTCTATTTATCAAACTTCGTCCACTTTATTAACATTGGATCTCCTCACACGAATTAACCTTGGTGCGTCTGAAGATAACAATTCCTTCATCAGGTACACGGATGACATATATGGAAGGTCTTGGGAAGTACAAAATAATTACTATAACGTTTCAATTAATACATCATCAGCTATTGATGTGGATAAACTCATCGATCCATACAAACTACCTACAGAAGTTTTGAGCACTGGAGTGGAGATGTTAAAGTCCGGTTCATTGGAATTCACACTAAACTATGGCACAAATTCTGAGTATTATGTGTATCTTCATTTTTTTGACTTTGAGGATAGGGCAAGTAAACAAAAACGGATATTGAATATCATTATTAATGGTTTTGATGATGCTGTTAGTGTCACACAATCCCTTACACTTCCATACTGGAAACCCAAGAGCATAATTCTACCTATAAAACAAGGGAAAGGCATTTTTAAGATATTGATTGAAGCCACCTCTGATTCTGACTTACCTGCCATGCTTAATGCTCTTGAGATATACAGAGTAATACCTCAGTCTGATTCTGCCACTCAACAAGAGGATGTTGATGCTATCTGGCACATAAAAGATTTTTATAAGATCTCTAAAATGAATTGGCAAGGAGATCCCTGTGAACCAAATAGTTTTACATGGGAAGGTGTAATTTGCAGCAATGGGGACACTCCAAGAATCATTTCATTAAACTTGAGCTCAAGCAAGTTGTTAGGTGGAATAGATGTCTCATTCTCCAACCTCACATATTTGGAGACTTTGGATTTGTCAAACAATGAATTGACAGGGGAGGTGCCAGAACTTTTTGCAAAACTGCCACAATTAAAGATCCTTAATTTGTCAAGGAATATGCTCACAGGTTCCATTCCTGAGAGTCTAAAGGCAAAGTCATCAAACAAATCTTTGCAATTGAGTTTGGATGGAAATCTTTGTTCCTATCAGGCAGGGTCGTGCAAGAGCAACAAACATAAGTTTATTATCCCATTGGTTGCATCTATAACAACATTTGTTGCAGTGGTCATCATAATAGCTATCATAGTTGTGGTGATCCGGAGACTTAGAAAAAATGGTAAAGTGATTTCTTCAATTTCTGTGAAAGATGAGTCACTGAAATCGACAAACCAAGTATTTTCTTACTCGGAGATCCTTAGAATCACTAATAATTTCACAACAATGATTGGAAAAGGTGGATTTGGTAAGGTTTACCTAGGTACATTAGAGTGTGGCAAAATTGTTGCCGTGAAGACACTTTCTTTGCCATCAACACAAGGGTATAAGGAGTTTCAATCAGAGGCAAAATTGTTAATGCATGTTCATCATAGAAACGTGGTTTCTCTTGTTGGATATTGTGATGAAGGTGAAACTAAAGCACTTGTTTATGAATATCTATCAGAAGGGAATCTCCAGCAAAAATTATCAGATAAAAATCCAAACTTTTTGGAATGGATCCAAAGACTTAAAATTGCTATGGATGCAGCAAATGGATTGGACTATTTACATAATGGATGTCAGCCACCTGTAATTCACAGAGACTTAAAAACATCCAACATCTTACTAGACGAAAATATGCATGCCAAGATATCAGACTTTGGAGTGTCTAAAACTTTTGCAAACGACACTGACACTTATGTCACAACTTACCCAGCAGGCACACCGGGTTACGTTGATCCTGAATTTTATTGCTCTGGAACCCTGAATAGAAAGAGTGATGTTTATAGTTTTGGTATAATTCTACTTGAGCTAATTACTGGTCAACCAGCTCTAAGAGGAACTCCAGACAATCTCAGTTACATACTTCCTTGTGTTAACAATAAACTCAGAACAGGAAATATCCAAGAAATAGTCGACCCAAGGTTGAAAGGGAACTACAATGCTGCATCAGCATGGAAGTTTATAGGGATAGCCATGTCTTGTCTTCCCCAAGTTCCAATTCACAGGCCTGACATTGGCCACGTAGCCTCAGAGTTAAAGGAGTGTTTGTCTCTCGAATTGTCACTAGAAAGGACTGTGAGCAATGTGAGGGATTCATTGGTCATGAATTCTAGACAGATTGAATTCCTTAATTAA | 2673 | 0.37 | MERKLQWILVLAVCASSLIHIVAENNEGAHRNLANIDYSGVISIDCGVNEGYTDKTTNLQYEADDIQFGEIYNISSIYNFNYVTQIQKQLNTLRSFPNGKRNCYTMTPKQGKNKKYIIRAYFAYGNYDNKNKPPIFDLYIGVNIFKTINFTEVDKVIRIEAIHFASIDTIDFCLVNIDQGVPFISLLELWPLDNSIYQTSSTLLTLDLLTRINLGASEDNNSFIRYTDDIYGRSWEVQNNYYNVSINTSSAIDVDKLIDPYKLPTEVLSTGVEMLKSGSLEFTLNYGTNSEYYVYLHFFDFEDRASKQKRILNIIINGFDDAVSVTQSLTLPYWKPKSIILPIKQGKGIFKILIEATSDSDLPAMLNALEIYRVIPQSDSATQQEDVDAIWHIKDFYKISKMNWQGDPCEPNSFTWEGVICSNGDTPRIISLNLSSSKLLGGIDVSFSNLTYLETLDLSNNELTGEVPELFAKLPQLKILNLSRNMLTGSIPESLKAKSSNKSLQLSLDGNLCSYQAGSCKSNKHKFIIPLVASITTFVAVVIIIAIIVVVIRRLRKNGKVISSISVKDESLKSTNQVFSYSEILRITNNFTTMIGKGGFGKVYLGTLECGKIVAVKTLSLPSTQGYKEFQSEAKLLMHVHHRNVVSLVGYCDEGETKALVYEYLSEGNLQQKLSDKNPNFLEWIQRLKIAMDAANGLDYLHNGCQPPVIHRDLKTSNILLDENMHAKISDFGVSKTFANDTDTYVTTYPAGTPGYVDPEFYCSGTLNRKSDVYSFGIILLELITGQPALRGTPDNLSYILPCVNNKLRTGNIQEIVDPRLKGNYNAASAWKFIGIAMSCLPQVPIHRPDIGHVASELKECLSLELSLERTVSNVRDSLVMNSRQIEFLN | 890 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g00982 | 890 | PRINTS | Leucine-rich repeat signature | 453 | 466 | - | - | |
Cca05g00982 | 890 | PRINTS | Leucine-rich repeat signature | 474 | 487 | - | - | |
Cca05g00982 | 890 | Gene3D | Transferase(Phosphotransferase) domain 1 | 665 | 879 | - | - | |
Cca05g00982 | 890 | Gene3D | Phosphorylase Kinase; domain 1 | 571 | 664 | - | - | |
Cca05g00982 | 890 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 709 | 721 | IPR008271 | GO:0004672|GO:0006468 | |
Cca05g00982 | 890 | ProSitePatterns | Protein kinases ATP-binding region signature. | 595 | 617 | IPR017441 | GO:0005524 | |
Cca05g00982 | 890 | ProSiteProfiles | Protein kinase domain profile. | 589 | 862 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca05g00982 | 890 | Gene3D | Ribonuclease Inhibitor | 384 | 530 | IPR032675 | - | |
Cca05g00982 | 890 | Pfam | Leucine rich repeat | 431 | 487 | IPR001611 | GO:0005515 | |
Cca05g00982 | 890 | Pfam | Protein tyrosine and serine/threonine kinase | 591 | 793 | IPR001245 | GO:0004672|GO:0006468 | |
Cca05g00982 | 890 | Pfam | Malectin-like domain | 44 | 374 | IPR024788 | - | |
Cca05g00982 | 890 | PANTHER | OS07G0107800 PROTEIN-RELATED | 35 | 874 | - | - | |
Cca05g00982 | 890 | SMART | serkin_6 | 589 | 862 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca05g00982 | 890 | SUPERFAMILY | Protein kinase-like (PK-like) | 573 | 857 | IPR011009 | - | |
Cca05g00982 | 890 | CDD | STKc_IRAK | 595 | 860 | - | - | |
Cca05g00982 | 890 | PANTHER | RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED | 35 | 874 | - | - | |
Cca05g00982 | 890 | Gene3D | - | 206 | 331 | - | - | |
Cca05g00982 | 890 | SUPERFAMILY | L domain-like | 412 | 505 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g00982 | Cca-Chr5 | 25823400 | 25833252 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g00982 | 37 | 865 | Receptor kinase-like Gene Family | AT1G51880 | 41.560 | 0.0 | 609 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Cca05g00982 | Malectin_like | 4.5e-78 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g00982 | - | - | vun:114194066 | 1049.65 |