Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00981 ATGAAATCGGTGTCAAAGGATGTTGAAGTCATCCAACTTGATTCTTCTCACGATGTGTCGAGAGATGTGCCTCTGGTTACTGGGTCAACCCAACAGTTAACCAACCCTCAACTAGATGTTGCTACGATGGCTTCAGTTTTAGCCTCGATAGAGATCCCTCCTCAGGTTAAAGAAGACAAGGTTCCTCAATCGGACCCTCTGGTGAATGAGGAGCCTAAGCAAGAGTCTGCCCAAGGTGAAGATTCTATCACGCTCCAACCCCCCTTGAGTCCAAACAAGGATTCGACCGAGTCTCCAAGACCCTTCACAACTTCTCCCTCAACCCAAAAGGGTACTACCTCTTCCATCCAGGGCCTTTCATCAATTCCTTCCCCAGATTTGGACTTGATGAGCTTCTTTAATGACGAGGATGAAGATATTAATAATATCTTCGAGGTGTTGAACAATTGGACGAGTGGTCCTTCTGGGTCGGAAAAAGAAAAAGGAAAAGAAAAAGTCATCGAGCAAGCAACATTTACTAACAGTGTTAAAATGATGGAGAAATTATGTGGTGCCAGTTTTGGCAACATGTTGAATCAGGGAAAGCCTTATTTGTTAACAGTGGGGTTGCAATTTGGGATGGCTGGAACATTCATCATCACCAAGGCATGTCTTGATCATGGAATGAGTCGTTTTGTGTTAACTGTTTATCGCAATGTCATTGCTGCCGTTGGCCTTGCTCCTTTTGCACTTATCTTTGAAAGGAATAGACCGAAAATGACAATGCCTGTCTTCATGCAGATAGTGGCCCTTGGATTTCTTGAGCCAGTGATTGACCAAACCTTCACTTGCTTGGGGATGCAATATACTTCGGCTTCATTTGCATCTGCTATTATGAACGCCGTACCTTCTGTAACCTTTGTCATAGCAGTAATCCTCAGGTTAGAGCGTGTGAATTTGAAGGAGTTACGTAGTCAAGCGAAGGTAATTGGAACCTTGGTAACCTTTGCTGGTGCTTTGTTGATGACCCTTTACAAAGGCTCAGAAATAAACCTATTTAATCATCCAAACAGTACCCACCATGAAAGTCACTCTCAGCAGGGTCACAAAAACTGGGTCACTGGGACCCTATTTTTATGCCTTGGTTGTTTGGCTTGGTCCTCCTTCTACATTCTGCAGTCCATAACGGTGAAAAGTGCTGTGGTTGCGTTGATAGCAGATCGTAACCCTCGGGCTTGGGCTATTGGCTTCGACTTCACACTCTATGGCCCTCTTTACGCTGGAATAATGAGTTCAGGCATAGCATATTATGTACAAGGGCTTGTAATGAAAAGCAGAGGCCCAGTGTTTATGACATCCTTTAATCCTCTTTTAATGATCATCGTTGCTACTTTGGGCTCTTTTCTTCTAGGAGAACAGCTCTACTTAGGAAGTATCATAGGTGCCATCATTATCGTAGTGGGTCTTTATTCAGTGGTATGGGGCAAAGCCAGGGACTATGAAGTCCTCAAACTGCCGTCAACAGCAACAGTAAAGGAGACCGAAACCCAACAGCTCCCAATTACTTCATCAACTCATAAATAG 1563 0.4408 MKSVSKDVEVIQLDSSHDVSRDVPLVTGSTQQLTNPQLDVATMASVLASIEIPPQVKEDKVPQSDPLVNEEPKQESAQGEDSITLQPPLSPNKDSTESPRPFTTSPSTQKGTTSSIQGLSSIPSPDLDLMSFFNDEDEDINNIFEVLNNWTSGPSGSEKEKGKEKVIEQATFTNSVKMMEKLCGASFGNMLNQGKPYLLTVGLQFGMAGTFIITKACLDHGMSRFVLTVYRNVIAAVGLAPFALIFERNRPKMTMPVFMQIVALGFLEPVIDQTFTCLGMQYTSASFASAIMNAVPSVTFVIAVILRLERVNLKELRSQAKVIGTLVTFAGALLMTLYKGSEINLFNHPNSTHHESHSQQGHKNWVTGTLFLCLGCLAWSSFYILQSITVKSAVVALIADRNPRAWAIGFDFTLYGPLYAGIMSSGIAYYVQGLVMKSRGPVFMTSFNPLLMIIVATLGSFLLGEQLYLGSIIGAIIIVVGLYSVVWGKARDYEVLKLPSTATVKETETQQLPITSSTHK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00981 520 MobiDBLite consensus disorder prediction 22 37 - -
Cca05g00981 520 MobiDBLite consensus disorder prediction 51 122 - -
Cca05g00981 520 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 339 - -
Cca05g00981 520 SUPERFAMILY Multidrug resistance efflux transporter EmrE 406 491 - -
Cca05g00981 520 MobiDBLite consensus disorder prediction 78 122 - -
Cca05g00981 520 Pfam EamA-like transporter family 196 336 IPR000620 GO:0016020|GO:0016021
Cca05g00981 520 MobiDBLite consensus disorder prediction 1 37 - -
Cca05g00981 520 PANTHER WAT1-RELATED PROTEIN 190 512 IPR030184 GO:0016021|GO:0022857
Cca05g00981 520 PANTHER WAT1-RELATED PROTEIN 190 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00981 Cca-Chr5 25791545 25801808 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00981 188 520 Nodulin-like Gene Family AT4G08300 46.499 2.07e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00981 - - gmx:100812238 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00981 05 25791545 25801808 Cca05g00981 05 25791545 25801808 ECH