Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00961 ATGAAGGACATATATGATCTGGGAGCAAGATCATTTTGGATACACAACACAGGACCCATTGGCTGTCTCTCATACATTTTGGCCAATTTTCTATCAGAAAGGGATGATTATGGTTGTGCAAAGCCATATAACGAAGTAGCCAAATATTTCAACCAAAAGTTAAAGGAAGCTGTGGTTCAACTTCGGAAAGACATTCCTCAAGCTGCAATCACATATGTAGATATCTACTCTGTTAAGTACTCAGCAATCCAAAGAAATACGGATTTGAGCTACCACTTGTTGCTTGTTGTGGCTATGGAGGGGAATATAACTATAGTAGTAGTGTTGGATGTGGAGGAACCATAG 345 0.3942 MKDIYDLGARSFWIHNTGPIGCLSYILANFLSERDDYGCAKPYNEVAKYFNQKLKEAVVQLRKDIPQAAITYVDIYSVKYSAIQRNTDLSYHLLLVVAMEGNITIVVVLDVEEP 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00961 114 PANTHER ESTERASE-LIKE ISOFORM X1 4 97 - -
Cca05g00961 114 Pfam GDSL-like Lipase/Acylhydrolase 1 80 IPR001087 GO:0016788
Cca05g00961 114 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 4 97 - -
Cca05g00961 114 Gene3D SGNH hydrolase 1 93 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00961 Cca-Chr5 25369052 25369495 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00961 1 78 Pollen Coat Proteome AT1G75930 35.802 5.19e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00961 - - gmx:100779094 148.288