Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00941 ATGTCCACGTCGACAGACAAAACGACGTCGGAGGAGGAGAAGAGAGCGTTCGTGGACGCGGAAGCGGCGTCGCTGCTCGTGAAGGAGCTGCGCGGAACCTTCGCCTCCGGCAAAACGCGCGGTTACCAGTGGAGAGTGTCGCAGCTCAAAGCGCTCGCTAAACTCATCGTCGAACGAGAGCAAGAGATCGTCGACGCTCTCCGAAACGACATCGCCAAGCCGCCGCTCGAAACCGTCGCTTACGAGATTGCTATGTTGAAAAACTCATGTAAAGTCGCACTCAAGGAATTGAAACATTGGATGACCCCTGAAAAGGTCAAAACTTCAATCACTACTTTTCCTTCTTCAGCTGAAATTGTACCTGAACCACTGGGGGTTGTGTTAATCATCTCTGCATGGAACTACCCTTTTTTGTTGTCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATACTGTTGTTTTAAAACCATCAGAAATTGCTCCAGCCACATCATCACTGATGGTGAAACTGCTGGGAGACTACATGGACAACTCATGTATTAGAGTTGTTGAGGGAGCAGTTGATGAAACATCTGCATTACTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGACGAGTGGCACGCATTGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTGTGTTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATATCAATTTAAAGGTAGCAACAAGACGAATAATTGCAGGAAAGTGGGGTTGTAATAATGGACAAGCTTGCATTTCTCCAGATTATATTATAACAACAAAAGACTATGCTCCCAAGTTGGTCGATGCCCTAAAGGCTGAATTGGAGACATTTTATGGAAAGAACCCATTAGAATCAAAAGATTTGTCCCGTATTGTGAACTCCAACCATTTTGCCCGCTTGACAAAGCTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGGAAAAAGGATGAAAGCAAATTGTAA 1017 0.4494 MSTSTDKTTSEEEKRAFVDAEAASLLVKELRGTFASGKTRGYQWRVSQLKALAKLIVEREQEIVDALRNDIAKPPLETVAYEIAMLKNSCKVALKELKHWMTPEKVKTSITTFPSSAEIVPEPLGVVLIISAWNYPFLLSLDPVIGAIAAGNTVVLKPSEIAPATSSLMVKLLGDYMDNSCIRVVEGAVDETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKAELETFYGKNPLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVYGGKKDESKL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00941 338 PANTHER ALDEHYDE DEHYDROGENASE 11 338 IPR012394 GO:0006081
Cca05g00941 338 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 232 337 IPR016163 GO:0016620
Cca05g00941 338 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 228 235 IPR029510 GO:0016491
Cca05g00941 338 SUPERFAMILY ALDH-like 26 335 IPR016161 GO:0016491
Cca05g00941 338 Pfam Aldehyde dehydrogenase family 33 334 IPR015590 GO:0016491
Cca05g00941 338 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 231 IPR016162 GO:0016491
Cca05g00941 338 PANTHER ALDEHYDE DEHYDROGENASE 11 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00941 Cca-Chr5 25150204 25157661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00941 11 338 Aldehyde Dehydrogenase Gene Family AT4G34240 66.159 5.05e-152 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00941 K00128 - gmx:100778722 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00941 05 25150204 25157661 Cca05g00941 05 25150204 25157661 ECH