Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g00926 | ATGCATAACCAAGTAATGCTATTGctccttctacttcttcttcttcttcttccttcACTCATGTCTCTCTTCACCAATGCTTCATCTTCCTCATGCCCCATGGATCTCGCCTACGTTGAAACCATTCCCTGGAACTCTTCACTCTGCAGAAACCCAGTAATTAACAACGACTCATGTTGCTCAACACTGCTCAGCGTCTTCGCCATTGCCCTCGCACAGCGCCTCAAAGAAACCTCCATTTTTTACCTTCCAGACGAAGACACTTCCTCCGCTTGCTTATTTGACTTCAAACTCAGGCTTCAAGCCTTGTCAATACCACAAACCATGGTTAGTCTTTGTTTCCCTGACCCAACACGTTTTGTTTACAACTCTTCAGCTTGTGCTGCTATCAAAACCACGCTAGATTGGAGGCAAAAGGTGGGCACGGTTACCTCATTGGACACATCTTGCAATGGTGATCTCAAAAGCAAAACTCGTTGCAGCGTGTGCTCTCATGCTGCCCACAACGTTACTTCCATGCTCAAGAGTATTGACCCAAAGGCTAATGGCAGAAAGTGTTTCTACTACGTAGTGTTGTATGCTGCTGGTGTTGTTAACCCGTTTGGCACAACGGATGTAAGCACCATGTGTTGCATATTAAGCCTGCCTCAACCGTCTAGTGGAGTGGCAAAAGGGTCATCAAGTAAGAGAGGAAAGGTGATGAAGCttgtttttttgtttttgggtgttggtgttggtgttgtgcttgcttttgtAATGATAGTTGTTTATAGGAAGTGGGGTAAGAGGAGGAGGGAGAGTGTTTATCATAGGGAAGTTGAGAACAAGGTTAGGGCTAGTGTTTTGCCTAACACTGGTGCTAGATGGTTTCATGTGTCGGAGCTAGAGCGTGCTACTAGCAAATTCTCGCGGAGGAATGTGATTGGTCAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTTGGATGGCACTGTGGTTGCAGTTAAGGAGATTTTTGATTTGGAAACTAAAGGGGATGAAGATTTCTGCTATGAGGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTTCTCTTAGGGGGGGTTGTGTTACAAGTGGTAATTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTTCATGCCTAATGGAAGCATCAGTGATCAATTGTCACTTGTTGGGGTTAATAGGTTAACATGGCCACAAAGGAAGAATATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCACTATGAAATCAAACCTCCAATTTATCATCGTGATATCAAAGCTACCAACATACTTTTGGATTCCAAAATGAAAGCTAAATTGGCTGATTTTGGGTTGGCCAAACAAGGTAGTGAGGACCAATCTCATCTCACTACAAGGGTTGCTGGCACGTATGGTTATGTTGCACCCGAGTATGCTCTTTATGGTCAACTAACTGAGAAAAGTGATGTGTACAGTTTCGGCATTGTGATTCTTGAAATCATGAGTGGAAGAAAAGTGATTGATGCTTTGAATTCATCGACGGATTCAATCACGGATTGGGTATGGACACTTGTGGAATGTGGAAGGGTGGGGGAGATTTTTGATGAATCAATAAGAGAAGGGCCAGAAAAAGTTATGGAAAGGTTTGTTCATGTTGGAATGCTTTGTGCTCATGCTGTGGTGGCGTTAAGGCCAACTATTGCTGAGGCACTTAAGATGTTAGAGGGTGGCATTGACATTTCCGAATTACCTGAGAGGCCAGTGCCACTTGGTCATGCGTCCTTTCAATCTTCTCTGTTGCATGGTTTGCAGATAAATGGTTGA | 1824 | 0.4194 | MHNQVMLLLLLLLLLLLPSLMSLFTNASSSSCPMDLAYVETIPWNSSLCRNPVINNDSCCSTLLSVFAIALAQRLKETSIFYLPDEDTSSACLFDFKLRLQALSIPQTMVSLCFPDPTRFVYNSSACAAIKTTLDWRQKVGTVTSLDTSCNGDLKSKTRCSVCSHAAHNVTSMLKSIDPKANGRKCFYYVVLYAAGVVNPFGTTDVSTMCCILSLPQPSSGVAKGSSSKRGKVMKLVFLFLGVGVGVVLAFVMIVVYRKWGKRRRESVYHREVENKVRASVLPNTGARWFHVSELERATSKFSRRNVIGQGGDGVVYKGTLLDGTVVAVKEIFDLETKGDEDFCYEVEIISKIKHRNLLSLRGGCVTSGNLKGKRRFLVYDFMPNGSISDQLSLVGVNRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKLADFGLAKQGSEDQSHLTTRVAGTYGYVAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVIDALNSSTDSITDWVWTLVECGRVGEIFDESIREGPEKVMERFVHVGMLCAHAVVALRPTIAEALKMLEGGIDISELPERPVPLGHASFQSSLLHGLQING | 607 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g00926 | 607 | SUPERFAMILY | Protein kinase-like (PK-like) | 282 | 574 | IPR011009 | - | |
Cca05g00926 | 607 | PANTHER | OS01G0253100 PROTEIN | 25 | 601 | IPR045271 | GO:0004714|GO:0006468 | |
Cca05g00926 | 607 | CDD | STKc_IRAK | 308 | 576 | - | - | |
Cca05g00926 | 607 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE-RELATED | 25 | 601 | - | - | |
Cca05g00926 | 607 | Pfam | SPARK | 27 | 186 | IPR043891 | - | |
Cca05g00926 | 607 | Gene3D | Phosphorylase Kinase; domain 1 | 263 | 382 | - | - | |
Cca05g00926 | 607 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 427 | 439 | IPR008271 | GO:0004672|GO:0006468 | |
Cca05g00926 | 607 | Pfam | Protein kinase domain | 304 | 572 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca05g00926 | 607 | Gene3D | Transferase(Phosphotransferase) domain 1 | 383 | 582 | - | - | |
Cca05g00926 | 607 | SMART | serkin_6 | 302 | 574 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca05g00926 | 607 | ProSiteProfiles | Protein kinase domain profile. | 302 | 595 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g00926 | Cca-Chr5 | 24829714 | 24831554 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g00926 | 26 | 606 | Receptor kinase-like Gene Family | AT1G11050 | 48.185 | 0.0 | 539 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RKF3 | Cca05g00926 | Pkinase | 5e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g00926 | - | - | gmx:100800481 | 893.649 |