Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00924 ATGCCTAATGGAAGCCTTTGTTACCAAATGTCACTTGGTGGGGCTAATAGTCTAACATGGCCACAAGGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCACTATGAAATCAAACCAATTTATCACAGTGACATTAAGACTACCAACATACTTTTGGATTCCAAAATGAATGCTAAATTGGCAGATTTTAGCTTGGCCAAGCAAGGTTATGAAGGCCAGTCTCATCTCACCACAAGGGTTGCTGGCACTTATGGTTATTTGCCATCAGAGTATGCTTTATATTGGCAACTAACCGAGAAAAAATGA 318 0.4025 MPNGSLCYQMSLGGANSLTWPQGKNIILDVAKGLAYLHYEIKPIYHSDIKTTNILLDSKMNAKLADFSLAKQGYEGQSHLTTRVAGTYGYLPSEYALYWQLTEKK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00924 105 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00924 105 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 1 104 - -
Cca05g00924 105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Cca05g00924 105 PANTHER OS01G0253100 PROTEIN 1 104 IPR045271 GO:0004714|GO:0006468
Cca05g00924 105 Pfam Protein kinase domain 16 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00924 105 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Cca05g00924 105 SUPERFAMILY Protein kinase-like (PK-like) 1 103 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00924 Cca-Chr5 24820189 24820506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00924 1 104 Receptor kinase-like Gene Family AT1G11050 66.667 2.59e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Cca05g00924 Pkinase 1.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00924 - - gmx:100799953 177.563