Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00917 ATGCTGAAGACGAAGGCGTTCCAAGGCGCCAACGTCTTCATGTCGCGAAACCTTGTTCCGCCCGAAGTCTTCGACGCGCTGCACGACGCCCTCAAAGATAACGGCGCCCAACTCCACCTCTGCTGCGACCCTTCCCGCAACGGCGCCAACGATTTCCACATCATTTCCTCCAGCAAACACGAGAAGTTCAACGATCTTAAATCCAAGGGATGCAAATTGCTCGGTCCTAGATGTGTTCTTTCGTGTGCAAAAGCCGGAAGGCCTCTGCCTACACGAGGCTTCACTTGTTGCCTTGTCATGGAAGGCGTCAAAGTACTTGCGTCTGGCTTTGATATGGATGAGAAGGTTAAAATAGAAGAGTTAGTGGCTGAAATGGGTGGAGTTCTACAGAATAAAGCATCATCAGATATGAACTTTGTCATTGTGAAAAATGTTTTAGCTGCAAAGTACAAGTGGGCTTTGAATACATTGAAGAAACCAATAGTCACTTTTGAATGGTTAAAACAATGCTCAGATGAGCATCGAGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCATTCTCTGGGTTAAAGATCTGTGTTACTGGAATCCCAGCAG 598 0.4682 MLKTKAFQGANVFMSRNLVPPEVFDALHDALKDNGAQLHLCCDPSRNGANDFHIISSSKHEKFNDLKSKGCKLLGPRCVLSCAKAGRPLPTRGFTCCLVMEGVKVLASGFDMDEKVKIEELVAEMGGVLQNKASSDMNFVIVKNVLAAKYKWALNTLKKPIVTFEWLKQCSDEHRVVPQESYKVLPFSGLKICVTGIPA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00917 199 Gene3D BRCT domain 97 188 IPR036420 -
Cca05g00917 199 Gene3D BRCT domain 32 94 IPR036420 -
Cca05g00917 199 ProSiteProfiles BRCT domain profile. 99 184 IPR001357 -
Cca05g00917 199 CDD BRCT 103 170 - -
Cca05g00917 199 SMART BRCT_7 97 174 IPR001357 -
Cca05g00917 199 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 7 199 - -
Cca05g00917 199 SUPERFAMILY BRCT domain 59 183 IPR036420 -
Cca05g00917 199 Pfam BRCA1 C Terminus (BRCT) domain 99 170 IPR001357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00917 1 199 Core DNA Replication Machinery Family AT1G77320 73.367 2.48e-99 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00917 K10728 - gmx:100804966 373.629