Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00914 ATGCAGTTATATCATCATCCATTGGATTTGGACAGCCAGAAGGTGAGACTTGCATTGGAGGAGGAAGGTGTAGATTATACATCTTACCATGTCAATCCCATAACTGGCAAGAACTTGGATTCCTCTTTCTTCAAGGTGAATCGCCGCGGAAGGATCCCGGTTTTCCAAAATGGCTCTCACATCATTTACAATACTATTGATATAATCCAGTACACAGAAAGAATTGCTGTGGTTTCCACCGGGGCTGAGACTGAGAGTATCAGTGCCAGTTGCAAGGAAGTGATTGAATGGATGCAGAAGATACAAGATTGGGACCCCAAGTTTTTCACACTTTCACACATACCAGAGAAATATCGCCTTTATGTTTCCAAGTTCATAAGGCAAGTGGTGATCGCTCGCATGTCAGAATCACCTGAATTGGCAGGAGATTACCACAGGAAGTTGAAAGAGGCCTATGAGACTGAAGAGAAATTGAAAGAAGATGTTCTGAGAAGGGGCAAGGAGCATTTGGTTAAACTGCTTGATGAGGTTGAGATGCAGCTTAGTGAAACACCTTATTTGGCAGGTCAAGATTTTACCATGGCTGATGTGATGCTCATTCCAGTATTAGCTCGTTTGAAACTCTTGGATTTAGAGAATGAGTACATAGCTGGAAGGCCAAACATTGCTGAGTACTGGATTCTGGTTCAGCAAAGGCCTAGTTATAAAAAGGTGATTGGGAAGTACTTCAATGGTTGGAGAAAGCACAAAACACTTTTAAAAACATGGTGCTTGGTTCGTGTAAGAAGTTTGCTGAAAAGGTACTAG 807 0.4213 MQLYHHPLDLDSQKVRLALEEEGVDYTSYHVNPITGKNLDSSFFKVNRRGRIPVFQNGSHIIYNTIDIIQYTERIAVVSTGAETESISASCKEVIEWMQKIQDWDPKFFTLSHIPEKYRLYVSKFIRQVVIARMSESPELAGDYHRKLKEAYETEEKLKEDVLRRGKEHLVKLLDEVEMQLSETPYLAGQDFTMADVMLIPVLARLKLLDLENEYIAGRPNIAEYWILVQQRPSYKKVIGKYFNGWRKHKTLLKTWCLVRVRSLLKRY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00914 268 Pfam Glutathione S-transferase, N-terminal domain 12 73 IPR004045 -
Cca05g00914 268 Gene3D - 143 239 - -
Cca05g00914 268 Pfam Glutathione S-transferase, C-terminal domain 162 225 - -
Cca05g00914 268 SUPERFAMILY Thioredoxin-like 1 71 IPR036249 -
Cca05g00914 268 CDD GST_C_family 160 226 - -
Cca05g00914 268 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Cca05g00914 268 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 268 IPR044617 GO:0004364
Cca05g00914 268 Coils Coil 145 165 - -
Cca05g00914 268 CDD GST_N_family 1 71 - -
Cca05g00914 268 Gene3D Glutaredoxin 1 75 - -
Cca05g00914 268 SUPERFAMILY GST C-terminal domain-like 145 242 IPR036282 -
Cca05g00914 268 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 116 252 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00914 Cca-Chr5 24622673 24624903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00914 1 268 Glutathione S-transferase Gene Family AT1G77290 67.658 3.00e-138 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00914 K22077 - gmx:100808461 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00914 05 24622673 24624903 Cca05g00914 05 24622673 24624903 ECH
Cca05g00914 05 24622673 24624903 Cca03g01085 03 26444182 26447432 PCT