Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00899 ATGCAAGAGCAAGAGGCGAAATTGAAGAAAACCAATTCGGAAGGAAGCTTCGTTTCGTTTAGTTTTCTTCTTCCATTGAATCTCATGGCGAGAGTGAAGCACACGTCAGCTTCTCGCAAGCCTGGAAATTACAACCCGCCGATTATACACAAGGACCTGAAATGTGATAATATATTTATCAATGGTCATCAAGGAGAAGTTAAAATTGGAGATTTGGGGCTGACAACTTTCTTGGAGCGAAGCAATGCCAAGAGTGTAATTGCTACACCATGGAAGAATTTCAATAAAAAGAAAGAGGCTGCCCTTAAGAAAAGGAAAGAGGGAACCCTTCAAGCCTCTGTGCACAAAGATAAATCTCATAGAGATGGCTTGAATGAGGATATTCATGCCATTGAGAAAAAAGCCCCCAGGAATTCCAGGGATGATAATAGAAGTAAACATAACAGTCACTATCCATGGATTCTTATTACCAAAAACAAGGTGAAATGGTTGGTTCACAACTATTCTCCGCCTCCACAAATTAACAATAGCATCAAGATGGAAGTTGGAATTGAAGATTGTCTGCACATTGAATTCGAATACAACAAAAGCAAGATGTTGGGGCTACAAAGATAG 615 0.3984 MQEQEAKLKKTNSEGSFVSFSFLLPLNLMARVKHTSASRKPGNYNPPIIHKDLKCDNIFINGHQGEVKIGDLGLTTFLERSNAKSVIATPWKNFNKKKEAALKKRKEGTLQASVHKDKSHRDGLNEDIHAIEKKAPRNSRDDNRSKHNSHYPWILITKNKVKWLVHNYSPPPQINNSIKMEVGIEDCLHIEFEYNKSKMLGLQR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00899 204 Gene3D Transferase(Phosphotransferase) domain 1 30 93 - -
Cca05g00899 204 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 43 90 - -
Cca05g00899 204 Pfam Vacuolar protein sorting-associated protein 26 160 199 IPR028934 GO:0006886
Cca05g00899 204 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Cca05g00899 204 Pfam Protein kinase domain 47 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00899 204 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 43 90 - -
Cca05g00899 204 SUPERFAMILY Protein kinase-like (PK-like) 46 91 IPR011009 -
Cca05g00899 204 MobiDBLite consensus disorder prediction 102 148 - -
Cca05g00899 204 Gene3D - 171 200 IPR014752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00899 Cca-Chr5 24243211 24248002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00899 45 90 MAP Kinase Kinase Kinase AT1G49160 76.087 2.13e-19 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Cca05g00899 Vps26 7.2e-14 CL0135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00899 K08867 - ccaj:109815746 177.178