Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00833 ATGTTTCTAACTCAGGATCTCTCCTCGCTCTATTATGTCTTCTCAGACTCCGTAACGAGTGCGAGGTGCAAGAGAAGCGAATTAGAGCAATGCCGCGACGAGTCGGAGGCCTTGATTTTGAAGTTGGTGGCGATGGCGTCGATTCTGGCGGCGGGGCTGGGGGGAATCGCGATCCCGCTGGCGGGAAAATGGCGGAGGGAGGGGGAGGCGTTTATGGCGGCGAAGGCGTTGGCGGCGGGGGTGATTTTAGCGACGGGGTTCGTGCACATGCTTCGGGACTCGTGGGAGGCGCTTTCGGACCCGTGCTTGGGGGGGAACTGGAACAAGTTTCCCTTCACGGGCTTCTTCGCCATGGTTTCGGCGCTGTTGACCCTGCTCTTTGACTTTTTGGCCACTGGCTACTACCAGCGCAGAGAGGAGCGTGGGAAGATAAAGGATTTTGTCCAAGAGAACGAGGCGTTGTTGTTGGAAACGGGAATAGTGGAGCTTGTTCACGCGCCGCAACCGCATCCTCATGACGTTCAAACTACCCTGCGCCACGTCGTCGTTTCGCAGGTATTGGAACTAGGGATTGTATCACATTCAATGATAATTGGGTTATCTCTGGGAGTTTCGCAAAGCCCTTGTACCATGAGACCCCTAATTGTGGCATTATCCTTCCATCAGTTTTTTGAAGGATTTGCACTTGGTGGTTGCATCTCCCAAGCCCAATTCAAGACCCTATCAGCAACAATAATGTCATGTTTTTTTGCACTAACAACACCAATTGGTGTTGCTATTGGGGCTGCTATTGCTTCAATTTTCAACCCTTACAGTCCAGGAGCACTCATCACTGAAGGCATCTTGGACTCCATCTCTGCTGGGATTTTAGTGTATATGGCTTTGGTGGACTTAATAGCTGCAGATTTTCTTAGCAAGAAAATGCATTCCAACTTTAGGCTGCAGATAATGTGTTACTGTTTGCTTTTCCTTGGGGCCGGATTGATGTCTACACTCGCAATTTGGGCATGA 1011 0.5074 MFLTQDLSSLYYVFSDSVTSARCKRSELEQCRDESEALILKLVAMASILAAGLGGIAIPLAGKWRREGEAFMAAKALAAGVILATGFVHMLRDSWEALSDPCLGGNWNKFPFTGFFAMVSALLTLLFDFLATGYYQRREERGKIKDFVQENEALLLETGIVELVHAPQPHPHDVQTTLRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIVALSFHQFFEGFALGGCISQAQFKTLSATIMSCFFALTTPIGVAIGAAIASIFNPYSPGALITEGILDSISAGILVYMALVDLIAADFLSKKMHSNFRLQIMCYCLLFLGAGLMSTLAIWA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00833 336 TIGRFAM zip: ZIP zinc/iron transport family 23 336 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cca05g00833 336 Pfam ZIP Zinc transporter 39 333 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca05g00833 336 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 171 336 - -
Cca05g00833 336 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 19 142 - -
Cca05g00833 336 PANTHER ZINC/IRON TRANSPORTER 19 142 - -
Cca05g00833 336 PANTHER ZINC/IRON TRANSPORTER 171 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00833 Cca-Chr5 22903255 22907911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00833 15 336 Inorganic Solute Cotransporters AT1G10970 58.445 3.19e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00833 K14709 - gmx:100809426 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00833 05 22903255 22907911 Cca03g01737 03 36489472 36491335 PCT