Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00817 ATGGTGTTCATACAAATCGAGTGGCTATTTCCTTTTCCATGTGTACCAATGTTCACCCTCATGGCGTTAATTGGAGGGCTATTGGGTTATCTTTATGGGCCCTATTGGGCGTTAAGGAAAGTTCCAGGCCCACCATCTCTGCCGCTCGTAGGACACCTTCCCTTGCTCGCCAAGTACGGCCCAGATCTCTTCTCACTCCTCGCCAAGGAATACGGCCCAATCTACAGCAGATTTCATATGGGAAGACAACCACTAATCCTGGTAGCAGATCCAGAGCTTTGTAAAGAGGTGGGAATAAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCTATTTCTGCTTCTCCTCTTCACCAAAAAGGTCTCTTCTTCACCAGGGACTCACGATGGTCAACCATGAGAAACACCATATTATCAATGTACCAGCCATCACACTTGGCTAGCTTAGCAGCATTTGGTGTCAACTTTGGCCTCTCTAACCCCCATTCAGTTTGTGAATCAATCAAGAGTGTTAACAATGTGAGAGATGAAGATAATGCTGAAGTATCAGATTTCATCAATCAACACATTTACTCCACAACACAGCTTAAGATGGACTTGTCTGGTTCTTTTTCCATCATACTTGGTCTACTTGCCCCAATACTTCAGGAGCCATTTAGGCAGGTTCTGAAGAGAATACCTGGCACAATGGACTGGAAAATAGAGCGTACTAATGATAAACTGAGTGGTCGTCTTGATGAGATTGTCAAGAGGAGAATGGAAGACAAGAACAGAACTTCAAAGAATTTCTTGTCACTCATTCTGAATGCAAGAGAATCAAAGACTGTATCAGAAAATGTCTTTTCACCTGACTACATTAGTGCTGTTACTTATGAGCACTTACTTGCTGGCTCAGCCACCACAGCCTTTACCATGTCATCCATTGTCTATTTGGTTGCTGGACATCCAGAAGTTGAGAAAAAGTTGCTTCAAGAGATTGATGGATTTGGTCCAGCTGATAGGACACTCACCGCCCATGATCTTCATGACAGCTTTCCTTATCTTGACCAGGTGATTAAAGAAGCCATGAGGTTTTACACTGTCTCCCCATTGGTTGCAAGAGAAACATCAAATGAGGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGTACGTGGGTTTGGTTAGCTCTTGGAGTTCTGGCAAAAGACCCAAGAAACTTTCCAGAGCCGGAAAAGTTCAAACCAGAGAGATTTGACCCCAAATGTGAAGAAATGAAACGAAGGCATCCTTATGCGTTCATACCATTTGGAATTGGTCCCCGGGCATGTATTGGTCAGAAATTTTCCTACAAGAGATCAAGCTTACTCTGA 1356 0.4344 MVFIQIEWLFPFPCVPMFTLMALIGGLLGYLYGPYWALRKVPGPPSLPLVGHLPLLAKYGPDLFSLLAKEYGPIYSRFHMGRQPLILVADPELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSMYQPSHLASLAAFGVNFGLSNPHSVCESIKSVNNVRDEDNAEVSDFINQHIYSTTQLKMDLSGSFSIILGLLAPILQEPFRQVLKRIPGTMDWKIERTNDKLSGRLDEIVKRRMEDKNRTSKNFLSLILNARESKTVSENVFSPDYISAVTYEHLLAGSATTAFTMSSIVYLVAGHPEVEKKLLQEIDGFGPADRTLTAHDLHDSFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSYKRSSLL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00817 451 PANTHER THROMBOXANE-A SYNTHASE 12 151 - -
Cca05g00817 451 SUPERFAMILY Cytochrome P450 35 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PANTHER THROMBOXANE-A SYNTHASE 152 447 - -
Cca05g00817 451 PANTHER CYTOCHROME P450 FAMILY PROTEIN 152 447 - -
Cca05g00817 451 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Cca05g00817 451 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS E-class P450 group I signature 438 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 Pfam Cytochrome P450 42 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 Gene3D Cytochrome P450 32 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g00817 451 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00817 Cca-Chr5 22546633 22551392 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00817 80 450 Cytochrome P450 AT2G26170 67.726 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00817 K20771 - gmx:100805689 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00817 05 22546633 22551392 Cca03g01728 03 36383476 36392735 PCT