Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00799 ATGCTTTACTACGTTCTCACCACTGGCTCGGGACAGCAAACCCTAGGAGAGGAATACTGCGATATCACTCAGGTTGCTGGGCCTTATGGACTTCCTCCAACCCCTGCTAGACGTGCTCTTTTCATTGTATATCAGACGGCTATTCCATATATCGCGGAACGAATCAGTTCTAGAATTGCTTCACGAGGCATTGTCCTTGCTGACTTGGAGTCTGCTGAGGGTTTTGGTGAAAATGGACACGGGAGCCTTAGTTCTCAGATTTCAGGCACCAGTCCTTCATCCTTGTCGGGACAATCTGTTACTACTATGTCAAGGTTGAAGGGGAAACTGAGTGCATTTTGGTTGCATTTGGTTCAGAGATGGCCTACGATGCTCCCTTTTGTGCGCGAGTTGTTGCAGTTGGTTCTTCGTGCTAACCTCATGTTATTCTACTTTGAAGGCCTCTATTATCATATATCCAAGCGTGCTGCAGGCATTCGATATGTATTTATTGGAAAAGCATCAAATCAAAGACCCAGATACCAAATACTAGGAGTATTTCTGTTGATTCAGCTTTGTATAATAGCTTCTGAAGGGCTGCGTCGAAGAAATTTTACTTCAATTGCTGGTTCAGTTCATCAAGCATCCTTCGCAACCCATCATGGATCAACAGGACATGGTTTGCCTGTTCTGAATGAAGAGGGTACTCTGGCTACTCCAGATATTGACAAAGGAAGTTGGGCCTCTGATTCTTCATCTTCTGAGCAGTATCATGCAACTAGTGGGGTTAGCAAATGCACACTTTGCCTGAGTAATCGTCAACACCCAACTGCTACATCCTGTGGCCATGTATTCTGCTGGTATTGTCTCGGTGCATTCTTACTGCTTACCATCGCTTCTTTCTGTGTCTCATTTTCGTGTTTGCTGTGA 909 0.4499 MLYYVLTTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFIVYQTAIPYIAERISSRIASRGIVLADLESAEGFGENGHGSLSSQISGTSPSSLSGQSVTTMSRLKGKLSAFWLHLVQRWPTMLPFVRELLQLVLRANLMLFYFEGLYYHISKRAAGIRYVFIGKASNQRPRYQILGVFLLIQLCIIASEGLRRRNFTSIAGSVHQASFATHHGSTGHGLPVLNEEGTLATPDIDKGSWASDSSSSEQYHATSGVSKCTLCLSNRQHPTATSCGHVFCWYCLGAFLLLTIASFCVSFSCLL 302
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00799 302 Pfam Pex2 / Pex12 amino terminal region 1 194 IPR006845 -
Cca05g00799 302 ProSitePatterns Zinc finger RING-type signature. 274 283 IPR017907 -
Cca05g00799 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 239 295 IPR013083 -
Cca05g00799 302 SUPERFAMILY RING/U-box 249 287 - -
Cca05g00799 302 MobiDBLite consensus disorder prediction 77 96 - -
Cca05g00799 302 CDD RING-HC_PEX10 258 283 - -
Cca05g00799 302 PANTHER PEROXISOME BIOGENESIS FACTOR 10 1 283 - -
Cca05g00799 302 MobiDBLite consensus disorder prediction 78 96 - -
Cca05g00799 302 ProSiteProfiles Zinc finger RING-type profile. 259 295 IPR001841 -
Cca05g00799 302 PANTHER PEROXISOME ASSEMBLY PROTEIN 10 1 283 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00799 201 295 C3H Transcription Factor Family AT3G58030 30.612 2.04e-06 47.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00799 K13346 - gmx:100783914 503.056