Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00781 ATGGCAGAAAAAAAACAGCCACTTAGATTACTACTAGAGATGGTAACAGTTTTCCTTCTGGTCCTCACAACAGAATCACTAAACTTCAACATAACAAACTTCAACGACCCCGAGAATGCAAAGAACATAGCATACATGGGTGATGGAAGGTCCAACAACGACGGGTCCATGGAACTCAACATCGTGACCTATCCTTTCCGCGTAGGGAGAGCCTTGTACGGACAACCCTTGCGCCTGTGGAACTCATCTTCTGGCGTTGCAACCGACTTCACCACGCGCTTCACTTTCACTATCGACAGAGCCACAACCGCTAACGACACCTACGCCGACGGTTTCGCTTTCTACATAGCCCCTCACGGTTACCAGATTCCGCCAAACGCCGCAGGTGGCACTTTCGCGCTTTTCAACAAAACCTCAAACAGCTTCCTCCCCCAAAACCGCGTTCTCGCGGTTGAGTTCGACACGTTCAACGGCACCACTGACCCTCCCATGCAGCACGTTGGCATAGACGATAACTCTTTCGTATCCGTTCGTTCTGCTCCGTTTGACATCGACAACAACCTCGGAAACAAATGCCACGCTCTCATAACCTACACTGCTTCCAACAAGTCATTCTCCGTGTCATGGTCCTTCGACGGAAGCGCGTCGCGAAATTCGAATTCTTCACTTTCTTACCAGATTGACCTAATGCAAACCCTACCCGAGTGGGTGGACGTTGGGTTCTCAGCTTCAACTGGAGACCATACCGAACGAAACGTCATTCATTCTTGGCAGTTCAGTTCAACGTTGAACTCCACTGTTTCGAATAATAATTCCTCGGGTAATAATGGAACGAACCACGGGAGCGGGTTGAGCgtggtggtgctggttgttgtggtgACGTGTCCGATGGTTTTGATGGCCGTGGCCGCGAATGTTGTGGCTTGGGTGGTAATCATGAAGAGAAGGGGTAATAAGGGGTGTAGTGATGATGATGAAGGTGGAGCCACCTTGGTGAAGTTTGATTTGGATAGGGCAGCTATACCTAGAAGATTTGATTACAAAGAATTAGTAGCTGCCACCAATGGTTTTGCCGATGATAGAAGGCTTGGACGAGGAGGCTCGGGACAAGTTTACAAAGGGGTTTTGAGTTATTTAGGAAGGGTTGTTGCCGTTAAAAGGATTTTCACTAACTTTGAGAATTCAGAGAGAGTTTTCATCAACGAGGTTAGGATCATAAGCCGTCTTATTCACAGAAACTTGGTGCAGTTCATAGGGTGGTGCCACGAGCAAGGTGAGTTTTTGTTGGTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGAGAAAAAAACTTTGGCCTGGGAAGTTAGGTACAAGGTAGCATTAGGTGTGGTTGTAGCACTTCATTATCTTCATGAGGATGCAGAGCAGAGTGTTCTTCACAGGGATATTAAGTCGGCAAATGTGTTGTTGGACACAAATTTCAGCACCAAACTTGGAGATTTTGGGATGGCAAAGTTGGTGGATCCAAGGTTGAGGACTCAGAGGACAGGGGTGGTAGGGACTTATGGGTATCTTGCCCCAGAATATATCAACGGAGGTAGGGCTAGCAAGGAATCAGACATTTATAGTTTTGGAGTTGTGGCTCTTGAGATTGCATGTGGTAGGAGAACTTACAAAGATGGAGAGTTTCACGTGCCTCTCGTGAACTGGGTGTGGCAACAGTATGTGGATGGGAATGTTCTGGATGTGGTTGATGAGAAATTGAACCAGGAGTTTGATTTGGATGAAATGACAAGTTTGATCGTTGTGGGGTTGTGGTGTACGAACCCTAACGACAAGGAAAGGCCCAAGGCTGCTCAAGTAATAAAAGTTCTTCAGCTTGAATTGCCATTGCCAGTGCTTCCACTTGATATGCATGATCATCCTCCTCCTTCTCTGGTTACCCATGAGCAAGTGCAACCTACTAATAATTCCTTACAGTCAATACCTTTCACTAACAGCCTTGTAAGTGTTGGGCGTTAA 2019 0.4626 MAEKKQPLRLLLEMVTVFLLVLTTESLNFNITNFNDPENAKNIAYMGDGRSNNDGSMELNIVTYPFRVGRALYGQPLRLWNSSSGVATDFTTRFTFTIDRATTANDTYADGFAFYIAPHGYQIPPNAAGGTFALFNKTSNSFLPQNRVLAVEFDTFNGTTDPPMQHVGIDDNSFVSVRSAPFDIDNNLGNKCHALITYTASNKSFSVSWSFDGSASRNSNSSLSYQIDLMQTLPEWVDVGFSASTGDHTERNVIHSWQFSSTLNSTVSNNNSSGNNGTNHGSGLSVVVLVVVVTCPMVLMAVAANVVAWVVIMKRRGNKGCSDDDEGGATLVKFDLDRAAIPRRFDYKELVAATNGFADDRRLGRGGSGQVYKGVLSYLGRVVAVKRIFTNFENSERVFINEVRIISRLIHRNLVQFIGWCHEQGEFLLVFEYMPNGSLDTHLFGEKKTLAWEVRYKVALGVVVALHYLHEDAEQSVLHRDIKSANVLLDTNFSTKLGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYINGGRASKESDIYSFGVVALEIACGRRTYKDGEFHVPLVNWVWQQYVDGNVLDVVDEKLNQEFDLDEMTSLIVVGLWCTNPNDKERPKAAQVIKVLQLELPLPVLPLDMHDHPPPSLVTHEQVQPTNNSLQSIPFTNSLVSVGR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00781 672 Gene3D Transferase(Phosphotransferase) domain 1 434 635 - -
Cca05g00781 672 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Cca05g00781 672 PANTHER - 27 640 - -
Cca05g00781 672 Pfam Protein kinase domain 358 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00781 672 SUPERFAMILY Protein kinase-like (PK-like) 342 650 IPR011009 -
Cca05g00781 672 PANTHER LECTIN RECEPTOR KINASE 27 640 - -
Cca05g00781 672 ProSiteProfiles Protein kinase domain profile. 357 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00781 672 CDD lectin_legume_LecRK_Arcelin_ConA 27 263 IPR001220 GO:0030246
Cca05g00781 672 Gene3D - 24 270 - -
Cca05g00781 672 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Cca05g00781 672 Pfam Legume lectin domain 26 270 IPR001220 GO:0030246
Cca05g00781 672 SMART serkin_6 357 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00781 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 263 IPR013320 -
Cca05g00781 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Cca05g00781 672 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Cca05g00781 672 ProSitePatterns Legume lectins alpha-chain signature. 233 242 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00781 Cca-Chr5 21672584 21675144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00781 10 637 Receptor kinase-like Gene Family AT5G10530 44.984 2.09e-179 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca05g00781 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00781 - - gmx:100305427 986.867