Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00767 ATGGGTGCCTCATCAAAAGTTTCTATTTTGGTTGTCTTCCTCCTCTTTGGGTTCTCAGTAGCTAAGGAAATATTGGTTGGAGGCAAGACAGATGCATGGAAGATTCCATCCTCTCAATCAGACTCACTAAACCAATGGGCAGAAAGATCTCGTTTCCAAGTTGGCGATTATCTTGTTTGGAAATATGATGGTGGGAAAGATTCAGTTTTGGAAGTGAGCAGAGAGGATTATGTCAACTGCAGCGTCTCTAAGCCAATAAAAGAGTACAGTGATGGAACCACTAAGGTGGAGCTTGACCGTCCTGGGGCATTCTACTTCATAAGTGGGGCAAAGGGTCACTGTGAGAAGGGTCAGAAGCTAGTTGTGGTGGTTTTGAGTCCAAGGGGGGGAGGAAGGTACACTGGTGTTActtcaccagcacctgcacctgcaccttctgctgcTGAGTTTGAAGGTCCTGCTATTGCTCCTACTAGCAGTGCCACTGCTTTGCACGGAGGCATTGTGATGGCTCTGGGAGTAGTAGCTGTGTGGGGGTTTTCAATGTGA 549 0.4372 MGASSKVSILVVFLLFGFSVAKEILVGGKTDAWKIPSSQSDSLNQWAERSRFQVGDYLVWKYDGGKDSVLEVSREDYVNCSVSKPIKEYSDGTTKVELDRPGAFYFISGAKGHCEKGQKLVVVVLSPRGGGRYTGVTSPAPAPAPSAAEFEGPAIAPTSSATALHGGIVMALGVVAVWGFSM 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00767 182 PANTHER BLUE COPPER PROTEIN 5 176 IPR039391 GO:0009055
Cca05g00767 182 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Cca05g00767 182 Gene3D - 20 128 IPR008972 -
Cca05g00767 182 CDD OsENODL1_like 22 125 IPR041846 -
Cca05g00767 182 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Cca05g00767 182 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055
Cca05g00767 182 PANTHER EARLY NODULIN-LIKE PROTEIN 3 5 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00767 Cca-Chr5 21337445 21338884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00767 7 180 Phytocyanin Superfamily AT4G31840 49.153 1.15e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00767 - - gmx:100527857 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00767 05 21337445 21338884 Cca05g00767 05 21337445 21338884 ECH
Cca05g00767 05 21337445 21338884 Cca03g01636 03 35398888 35399908 PCT