Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00757 ATGGAACCAACAACGTGCCTCAATCTTAACCTCGATCCTTCGAAGCACATGGACGATGTTTTGTTACAAGAGTTGCGTCGTCTAAGTTGCGAGAACAAGAGGTTGACCCACATCTTGACCCAATTGTGCGACAATTACATGGCTCTGCAAAACCAATTGAACCAATTGATCAACAACACAGATTTTGAGCAAGACCCAATTGAGTCTCGCAAGAGAAAATTAGCTCATGAATCTTGCACCATCAAATTCAATGCTGAGTGCAGCTCCATCACCCACAAAGATTTCAACTCCTCCCCTAAGGTTTCCAAAGTTCTTGTCAAGACCGAAGCATCTAATAATAGCTTATATGTCATGGATGGATATCAATGGAGGAAATATGGTCAGAAGGTCACTAGAGATAACCCCTCTCCTAGAGCTTACTTCAGGTGCTCCTTTGCCCCAACCTGCCCCGTAAAAAAGAAGGTGCAAAGGAGTATAGAGGACCCTACAATACTTGTAACTACTTATGAAGGAGAGCACAACCATGGTCGACAGCAAGCAGAAATATCACTTGTATCAAAGCAAAGTGAAAATGAAACCCCTAAAGCTAAAGGGTCAAGTCCTGTTTCCTCACCTACTACTACTCCCACCGTAACGCTTGATTTGGTCAACTCAGGATTGGTTGAAAATGGTCAAAAGTCCTCTATCCAGCAGTTTTTGGTTCAACAAATGGCCACTTCTTTGACAAGGGATCCCAATTTCACAACAGCTCTTGCCACTGCCATTTCAGGAAAAATTCTAGAGGCCAAATGGTGA 795 0.4314 MEPTTCLNLNLDPSKHMDDVLLQELRRLSCENKRLTHILTQLCDNYMALQNQLNQLINNTDFEQDPIESRKRKLAHESCTIKFNAECSSITHKDFNSSPKVSKVLVKTEASNNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPTCPVKKKVQRSIEDPTILVTTYEGEHNHGRQQAEISLVSKQSENETPKAKGSSPVSSPTTTPTVTLDLVNSGLVENGQKSSIQQFLVQQMATSLTRDPNFTTALATAISGKILEAKW 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00757 264 ProSiteProfiles WRKY domain profile. 112 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca05g00757 264 Gene3D WRKY domain 100 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca05g00757 264 Coils Coil 39 59 - -
Cca05g00757 264 SMART WRKY_cls 117 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca05g00757 264 MobiDBLite consensus disorder prediction 187 210 - -
Cca05g00757 264 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 8 262 IPR044810 GO:0003700
Cca05g00757 264 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR-RELATED 8 262 - -
Cca05g00757 264 Pfam WRKY DNA -binding domain 119 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca05g00757 264 SUPERFAMILY WRKY DNA-binding domain 115 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00757 Cca-Chr5 20913140 20914508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00757 21 261 WRKY Transcription Factor Family AT1G80840 46.038 1.43e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca05g00757 WRKY 4.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00757 - - ccaj:109791738 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00757 05 20913140 20914508 Cca03g01629 03 35315508 35317306 PCT