Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00755 ATGGCATTGTTCCGCAAGTTCTTCTATAAGAAGCCCCCAGATGGGCTTTTAGAAATCACTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAAGATGAATATAAAGTGTATATAGGGGGAATAATTGGGCAACTTCGTGGTCACTTCCCTGATGCTTCATTTATGGTGTTTAACATGAGGGAGGGAGATAGCCAAAGCCAGATTTCAAACATTTTGTGCGACTATGATATGACTGTGATAGACTATCCTCGACAGTATGAAGGTTGCCCGTTACTTACCATGGAAATGATTCACCATTTCTTGAGGTCAGGTGAAAACTGGCTCCAACTTGGGCAACAAAACGTTGTCTTGATGCACTGTGAACGAGGTGGGTGGCCGCTATTAGCATTTATGCTTGCTGCACTCTTGATTTATAGAAAGATGTTTACAGGGGAGCAGAAAACATTAGACATGATATACAAGCAAGCTCCTCGAGAACTTTTGCAGTTGATGTCACCATTGAATCCATTACCTTCACAATTGAGGTATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGGGCACTTACTTTGGACTGTGTAATTATAAGACTCATTCCTAACATGGGTGGAGAGGGTGGTTGCCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATCCCTGCAGATCGGACTCCCAAAGTTCTCTTTTCAACTCCTAAAAGGAGCAAACTTGTCCGGTATTGCAAGCAGTCTGATTGTGAGCTGGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTTGTTTTTGAGTGTATTCATCTGGACAGTGATTTAGAGCGTGAACAAATGATGTTTCGGGTGATGTTTAATACTGCATTCATAAGGTCAAATATTTTGATGCTTAACCGTGATGAGATTGACATATTATGGAATGCTAAAGATTACTTCCCTAAAAATTTTAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCATCTTCTGTTATTTCAATTGATCTGCCGGGTGTTGAGGAGAAAGAAGGCCTGCCTGTTGAAGCATTTGCTAAGGTTAAGGAAATTTTCAGCCATGTGGACTGGCTAGATCCAAAGGCAGAGGTAGCAAGTGTGCTCCAACAGATCACAGCATCAAATATCTTTCTGGAAAGATTGGACAGTGGGGTAGCTAGTGGCTTGCAAAAGGAGTCACCAGGAATATTTAAACTTGATTCGAATGCACACAGTGATACAAAGGATCTGACTTCCGAAGATCAGGAGAAACTTTCTACATCCTCATTGCGATCATCTGTGGATCTTCCTATGGAAAATAAGACAACACCATTAGAAACAAAGACATTGTCAAAAAATAATCTTGAGACCCTTAAATGTTTAGGTCAGGGGAACCAACCTATTTCCTCATCTGGGCTCTCAACAGATACATATTCTACTAAAAAGGAAACTGAACTGTTAGAAGCAAAAAAATCATTGGAAAATGATATGAAGTTTACTGCACCTATGGCTCATGAGAATCAATCTATCCCCATAATTGAGCCATCTATGGATGCAAATTCAATAAAAAAGGAGAGTGGATCATTAGGATCCAAGGAGAACAATACTCAATCATTAGCATCAGAGGCACATTTGGAAAGTGATAGCAGATTCAAATCGGAGCCGGAACTCCTTTCAAAAATTGATATAAAAAGTGCTACTTCTAAAGTTGAAGGGAATCTTTCTATGTCCTCATTTGAATCATCAGGTAATGCTCCTATGGAAAAGGACAAAGATCCTGTAGAATTAAAGGCATCACTAGAAAATAACACCAAGACTCTTGCTTCCATGAGTGAGGGGAAACAGCTCATTCCCTCACTTGGTCTCTCAGAAGATTCTACATCCATGGCTCATGGGGAGCAGTCTATGCCCTTAATTGAACCATCCAAGGATGCAAATTCAATGAAACAGAAAATGGGACCATTAGAGTCAAAGGAAAAGGATACTGAATCATTAGAATCAAAGTCATTGTCGGAAAATGATACCAATCGTCCTCCATCTATGGCTCAAGGGAAGCAATCCATTCCCTTAATTCAACCATCGATGGATACAACTTCAACAAAAAACATGGGACAATTACTTGAATCTCCCATTGATGCAAACTCAATTAAAAAGAAGATAGAACCTCAAGAATTGCAGGTTGCACTTCAACTTCCCACCCAATCTAAAATAATTTCACCGCAGGTGCGCCCAGCTGTTCGATCCGCTTCTGCTTCTTATTGTAACTCCTTTCAAGGTTCACCTGTAGCTATCTCAAGATATCATAGTGCACCATCATCTCTTGGAATAACATCTGTGTTGCAGGATCATGCTGTGACAAAATCTCCTCGACCTTCTACTTCGCCTCCTTCGGACTCCAAGGTGCTAAAATCTATAGAGCCTAGTTCTACAAATTTTTCTCCAACATCATCACCATCACCACCATTGCTTTCGTCTTTACCATTAAAAGCTTCAGTTGATGCTCTTACTGCAATGGAGAAGACTTTTGGATCCTTTGCTCCCGCAACTGTCActcctcctcatcctcatcctcgtccaccaccaccacctcctcAAGGTGAGCACACTTCAACATTGATGCAATATAATGTTATACAACACCCTGAAAACACAATGCATGAAGGTCAGAAATCATTGTTGAGGcctcctccccctcctcctccactctcttccCTTCCAGGAACATCAATTTCCACCCCGAAAGATTCATTTAAAGGtcctccatcaccaccacctccacctacacctccTTCTTCAACTAGACAGGCTTCATCATCTTTGGTAcctcctcctcctcctccaccACTGTCTGAGTTTCCTTCTTCAGCTTCCCACCCTCTTTCTTCATCATTGAGTATATCTGGCcctcctcccccacctccacctcctAGCCATTTTGATTCTACTCCATCGCCGTTAGCACCACCTCCCCCCCCTCCTCCCGCTCGTAGCCATTCCAATTCTACTCCATCGCCATTAGCACCACCACCACCCCCTCCTCCAGCTCCTAGCCATTCTGGTTTTACTccatcaccattagcaccaccaccccctcctccaccaGTTTCTGCATCCCAAAATTCTTTGTCCAACACAAATGCTCCACCTGTACCCCCACCTCCTTCCAACGGGTTGTCAAAACCCTCTGTTCCTGGACCACCTTCTGTACCTGGACCACCTTCTGTTCCTGGACCACCTTCTGCTCCATTTGGTGCAAAGGGACGTGGCCTATCACGATCTAATGCAAGAGGTCCACAGAGTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACGAGGGCCATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTAGATGAATTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGACTTTGTTCTCTGCAGCTGCTCCAAATCCTGATGATAAAGGAAAATCAACACGCCGCCCCTCACAAAAAGTTGACAAAGTTCAATTGATTGAGCTTAGGCGGGCATATAACTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCTGATTTGATGTGTGCTGTGCTTGCAATCGATGATTCAGTGTTAGATGTTGATCAAGTAGAGAACCTCATAAAATTCTCTCCAACCAAAGAAGAGATGGAACTGCTCAAGAACTATAATGGGGATAAGGACAACTTGGGAAAGTGTGAACAGTTCTTCATAGAATTAATGAAAGTGCCTAGAGTGGAAAGCAAGCTAAGAGTGTTCGCTTTTAAGATGCAATTCTGCTCCCAGGTTTCAGAGCTTAGAAGGGACTTGAATATTGTAAATTGTGCTTCTGAAGATATAAGGAATTCAGTCAAGCTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCGGCTGTTGGGTTTCGATTGGATAGTCTACTTAAACTTACTGATACACGAGCTAGAAACAGCAAGATGACTCTTATGCATTATCTTTGTAAGGTGCTTGCTGAAAAACTTCCAGAACTACTAGATTTCCCCAAAGATCTACTGAGTTTGGAGGCTTCAACCAAGATACAACTAAAGTTTCTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTTGTTCAGGAATTAACTGCGTCAGAGAATGATGGGGCTGTGTCAGAAAACTTCTGCCAGATTCTGAAGGAATTTCTTTCTTATGCTGAAGCTGAAGTGAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTTTATACTTTGGTGAAGATCCAGCACGTTGCCCATTTGAACAAGTTGTATCTACACTGCTCAACTTTGTGAGAATGTTCGTAAAAGCGCATGATGAAAATTGCAAGCAGATTGAGTTAGAGAAAAAGAGAGCAGAGAAGGAAGCAGAAAATGAGAAGGCGAAGTTAGCTGCTGCTAAAAAGGAGTCTGAACCGATGATAAGGACCACCATCAAGAGTGGGAATGTTAAATGA 4584 0.3973 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEEDEYKVYIGGIIGQLRGHFPDASFMVFNMREGDSQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLIPNMGGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKRSKLVRYCKQSDCELVKIDIHCHVQGDVVFECIHLDSDLEREQMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDYFPKNFRVEVLFSDMDASSSVISIDLPGVEEKEGLPVEAFAKVKEIFSHVDWLDPKAEVASVLQQITASNIFLERLDSGVASGLQKESPGIFKLDSNAHSDTKDLTSEDQEKLSTSSLRSSVDLPMENKTTPLETKTLSKNNLETLKCLGQGNQPISSSGLSTDTYSTKKETELLEAKKSLENDMKFTAPMAHENQSIPIIEPSMDANSIKKESGSLGSKENNTQSLASEAHLESDSRFKSEPELLSKIDIKSATSKVEGNLSMSSFESSGNAPMEKDKDPVELKASLENNTKTLASMSEGKQLIPSLGLSEDSTSMAHGEQSMPLIEPSKDANSMKQKMGPLESKEKDTESLESKSLSENDTNRPPSMAQGKQSIPLIQPSMDTTSTKNMGQLLESPIDANSIKKKIEPQELQVALQLPTQSKIISPQVRPAVRSASASYCNSFQGSPVAISRYHSAPSSLGITSVLQDHAVTKSPRPSTSPPSDSKVLKSIEPSSTNFSPTSSPSPPLLSSLPLKASVDALTAMEKTFGSFAPATVTPPHPHPRPPPPPPQGEHTSTLMQYNVIQHPENTMHEGQKSLLRPPPPPPPLSSLPGTSISTPKDSFKGPPSPPPPPTPPSSTRQASSSLVPPPPPPPLSEFPSSASHPLSSSLSISGPPPPPPPPSHFDSTPSPLAPPPPPPPARSHSNSTPSPLAPPPPPPPAPSHSGFTPSPLAPPPPPPPVSASQNSLSNTNAPPVPPPPSNGLSKPSVPGPPSVPGPPSVPGPPSAPFGAKGRGLSRSNARGPQSKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELETLFSAAAPNPDDKGKSTRRPSQKVDKVQLIELRRAYNCEIMLTKVKIPLPDLMCAVLAIDDSVLDVDQVENLIKFSPTKEEMELLKNYNGDKDNLGKCEQFFIELMKVPRVESKLRVFAFKMQFCSQVSELRRDLNIVNCASEDIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNSKMTLMHYLCKVLAEKLPELLDFPKDLLSLEASTKIQLKFLAEEMQAISKGLEKVVQELTASENDGAVSENFCQILKEFLSYAEAEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFVKAHDENCKQIELEKKRAEKEAENEKAKLAAAKKESEPMIRTTIKSGNVK 1527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00755 1527 MobiDBLite consensus disorder prediction 1499 1517 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 950 964 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 879 897 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 434 458 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 928 943 - -
Cca05g00755 1527 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 585 609 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 861 878 - -
Cca05g00755 1527 SMART PTEN_C2_2 197 337 IPR014020 -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 1499 1527 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 1158 1177 - -
Cca05g00755 1527 Gene3D Formin, FH2 domain 1125 1515 IPR042201 -
Cca05g00755 1527 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Cca05g00755 1527 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1179 1504 - -
Cca05g00755 1527 SMART it6_source 903 1525 IPR015425 -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 856 1117 - -
Cca05g00755 1527 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 682 713 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 635 713 - -
Cca05g00755 1527 Pfam Formin Homology 2 Domain 1111 1477 IPR015425 -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 1057 1091 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 976 1048 - -
Cca05g00755 1527 Gene3D - 196 341 - -
Cca05g00755 1527 PANTHER FORMIN-J 936 1520 - -
Cca05g00755 1527 PANTHER FORMIN-J 1 959 - -
Cca05g00755 1527 Coils Coil 1478 1514 - -
Cca05g00755 1527 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1106 1503 IPR015425 -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 795 833 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 533 564 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 903 917 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 414 458 - -
Cca05g00755 1527 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Cca05g00755 1527 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 533 555 - -
Cca05g00755 1527 MobiDBLite consensus disorder prediction 664 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00755 Cca-Chr5 20861638 20884420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00755 719 798 FH2 protein (formin) Gene Family AT2G25050 45.679 9.18e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00755 - - var:108338170 1883.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00755 05 20861638 20884420 Cca05g00755 05 20861638 20884420 ECH