Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00745 ATGGATGATCCAGGTGAAGAAAATGTGTTCAGGAGGTGCAATAGAAGATCATCAACCGGTTGGAGGTGCAAGGAGGGGGCTATGAGTGGAAGAAATCACTGTGAGAGGCATTATCTGTACATGCAACAGAGAACCAAGAGTGGGAAGAAGAGAAATGCTTCTGGGGGTGTTGGTGTGCGCCAGAAAAGAAGAATGAAACAAAGAAAAAACCCTGAAGGCGAATTGGAAAATGGGGTTGTGGGTGATGGGGGTAAAGAGTTGTTTGATGATCACAATGGTGGTCCCCATGTTGATGAAGGGCATAATGATGGGGTGAATCTTGGTTTAGGTTTTGAGAGTTTTGACCTTTGGGGTGAAGGAGGGGGTCAGCACGTTAACCTGGGTGATTTTGGGGGAGGGTTTGGGAATTTGAGTCAGGTTGAAGGGCAGGTTCTAGGTGAGCCATGGAGCAATGGAAGTACTGGTGGGGTTTTTGATGCTGTTCAGGGAGGCCATGCAAGTGCGGGTGGTGTACATATTTGTGAAAATGACTTTCTGGACCTTTCTTCTGAAGATCTACAAGGGCTAATGGTTGAAGCTGATTTTGGTAGTCTATATGATCAGGGTTTTCAAGCTCTTCTTTGTCAAGGTGGGGGCTGTGAGGAAGATGTGATTTTCGTTGGCTCTGATAGAGCCATGCCCAACTTTTCAGCTCCTGTTGGCCCGGGGTTGAGTGGTGAAAATGCATTTGAGTTTAGAGGTGAAGAAGTTGTTGGGTGTGCGGTAAATCCAGGTGGGCACGGTAAAGTTGAAGGAGAAACATTTGGTAGCATAGATGTGCCTGTGTTAAATGGCAGGCAACAGAATGGGGACACAGGATCAAGTAGCAAGATGATTGTTGTAGGTGATGAAGAGGGAATGGAACGATTATTAGATGGAGGAGTTGCCACCAGTGAAGATGCAAAAGCTGTAGCCTTCGGGCCAGTTGCTAAAGGAGGTAGGCCTAATGGTTCCAAAAATAAAGATAAACAGATTCACACCACTTTGAATGGACAAACTGTTGGTGCAAATGATGAAGCAGGAACAAATGGGACGAGTAGTGTCACAGTTTTAGGGTCTGTCTCTGAGGCTGTTGATGAAGGTGCAGTCCTCAATGAGATTGTAAGGCCAATGAAGAGTGGTCAACCAAAGGATTCAACTGGGGTGAGTAGTGTCACAGTTTTAGAGTCTGTCTCTAAGGCAGGTGATGAAGGTGCTGGCCTGGGTGAGTTTATGAGGCCAAAGAAGCGTGGTCGACCAATGGGTAATAGGATGACTAATGCCACATTTTTAGAGTCTGAAAGATCTTTTAAGGAAGATAAGGCTGGTGATGAAGGTGCTGGCCTAGGTGAGATTGTGAGGCCAAGGAAGCGTGGTCGACCAAAAGGTTTGAATATGATGAATAATGTCACAGGTTTAGAGCCTGAAAGGTCAGTGTTTTCTGTTGAGGAAGGTAAGGCTGGTGATGAAGGTGCGGGTTGGGGTGAGATTGTGAGGACAAAGAAATGTGGTCGACCAAAGGTTTCATGTTGGATGGGTAATGTCTCAGTTTTAAAGTCTGAAAGACCATTGTTTTCTGGCGAGGAAGATAACACTGGTGAAGAAGGCGCAGACGGTGAGATTGTGAGGCCAAAAAAGCGTGGTCGACCAAAGGGTTCAAATAAGACAAGTACTACCACAGTTTTAGAGTCTGAAAGGCCATTGTTTTCTGGTGAGGAAGATAAGGCTGGTGATGAAGATGCAGACCTGGGTGTGATTGAGAGGATAAAGAAGCGTGGTCGACCAAAAGGTTCCGGGAATAAAAAGAATACTTTTCATGTAAGTAATAAACTTTACGTAAAGATTGCAGGACTCAAGAAGCTTGGTCAACCAAAAGGTTCAAAAGGAAGAAAGAAGATTGTGGTTTTGGTTGGTAATAAATTTGTTGGTGAGATTGCAGTACTTCAGAAGCGTGGCAGGCCAAAGGGTTCAAAAAATAAAATAAAAAATGTTGTTGGTAATGAAGCTGCTGGTGCCGGTGAAATTGCAGTCCCCAAGAAGCTTGGTCGACCAAAAGGTTCAAAAGGAAGAAAGAATAATGTTGTGTTGGTTTGTGAGATTGCAGGACCTAAGAAGTGTGGCAGGCCAAAGGGTTCAAAAAATAAAATGAAGAATGTTGTTGAGGTTGGTAATGAAGTTGCTGGTCGTGGTGATATTGCAGGACCTAAGAAACGTGGTCGACCACCAAAAGGTTCAAAAAAAATACAGAAGATTGGTGAGGTTAATAATGAAGTTGCTGGTGCTGGCGAGATCACACGACTGAAGAAACGTGGTAGACCAAAAGGTTCAACAAAGAAATGGTGCACTGTTGTGTGTGCTTCTAGTAAGGAAGTGGCAGGTGAGATTGCAAGATATAAAAATATGCCTGGAGAAGCTAGAAACCATTTTGACAAGGGGGCAAAAAAGCGTGGCAGGCCTAAGGGCTCTAATAGAAAGGAAAAGGAGTTTTCTTACCATTTTAATTCACAGATTAAAAGGCATGGTCTTGTAGATGAGAAAGAAGGAAGAACTTCTACTGAATTTGCCTCCATAAATGATATTGATCAAAAGAAAAGAAATTATAACCAACAAAGAAGTTTTAGAATTACAAGACAAAGTATTAGCCAAAGCCAATCAAGAGGTCTAAAAGAACAGACACCAGCTGCCAATGCTATAGCAGATGAGAATGAGCCAAATGGTTTAACACACAGGCCCCCTACAAATGTGAGAGGACAACCCTTAAAAAAACAGAAAAGTACTCGTTTCAGCGAAGTTTTGAGTAGGATTATGCCACAGAAGCATGTACAGGAGGAATGCATTTCAATGCTAGAAGATCAAGTGAATGAGGTAAAGAAGTCAGGTTTTCTCCTTGAAAGCTCAGAGGATCCTGGAAATGAAAAGATAAAAAGAGCAGGACTGACTTGTAAAACCAGCAATGATCAGAGAAGGTCCAGTGAAAGACTGAAAGCATTGGTAATCGATGAAAAGAATTTTCAGGATGTTGGAGGGGAAGAATCTATATACCATGGATTGGAATCTTCAGCTTTGAAGGGTGATACTGGAATGAAAAAGGACGCAAGGACTTTAAGGTGCCACCAGTGCTGGCAAAAAAGTAGGAATGGTATTGTCATTTGTACCAAGTGCAAGAGAAAGCGATATTGTTATGAGTGCATAACAAAATGGTACCCAGATAAAACTAGAGAGGAGATGGAAACAGCTTGTCCCTTTTGTCTTGGTAATTGCAACTGCCGATTGTGCTTGAAGGAGGATATATCAGTAGTGACTGGGACTGGTGAAGCAGATACAGAAGTCAAATTACAAAAGTTGTTTTACTTGCTTGACAAAATTCTGCCTTTACTCCAAAATATCCAATTGGAGCAGAGATCAGAATTGGAAGTAGAAGCTAGCATGCATGGTTCGCAACTGCTGGAAGAAGAAGTTGTGCGTTCACTAATTGATGATAATGAGCGTGTTTATTGTGACAACTGCAATACATCAATCGTCAATTTCCACAGAAGTTGTCCCAATCCTGATTGTCAGTATGATCTTTGTCTCGCTTGTTGCATGGAAACAAGAATTGGACTTCAATGTGAAGAAATTCCTGCAAGTGGCAATGAAGGAGCAGATGATACACCACCTGTAACTTCTGCTTGGAGAGCAGAGATAAATGGTGGGATTCCTTGCCCTCCAAAAGCAAGGGGAGTGTGTGGTACTACTATTCTTTCACTAAAGCGCCTTTTTGAAGCTAATTGGGTTGAGAAATTGATCAAGAATGTGGAGGAACTTACTATCAAATATCAACCACCTAATATTGATCTATCTCTTGGATGTTCTATGTGCCAGAGTTTTGAGGAAGATGCAGTACAGAATTTTGTAAGGAAGGCGGCTTCCAGGGAAATCAGTTATGGTAACTTTTTGTATTGCCCAGATGCTGTCAAAATGGGAGACACGGAATTTGAGCATTTTCAAAGACACTGGATCAGAGGTGAACCTGTTATAGTTAGGAATGTTTTTGAAAAGGGTAGCGGCCTTAGCTGGAATCCAATGGTGATGTGGAGGGCTTTTAGGGGGGCAAAGAAGATATTGAAAGAGGAGGCAGCTACTTTTAAAGCCATTGACTGCTTGGATTGGTGTGAGGTTGAAATTAACATCTTTCGGTTCTTCAAAGGCTACTTGGAAGGTCGAAGGTACAGGAATGGATGGCCAGAGATGCTGAAGCTAAAGGACTGGCCACCATCAAATTCTTTTGAAGATTGTTTGCCAAGGCATGGTGCTGAGTTTGTAGCTATGCTTCCTTTAAGTGATTATACCCATCCCAAATCTGGTGTTTTAAATCTTGCCACAAAGCTTCCTGCTGTTTTGAAGCCAGATTTGGGCCCAAAAACATACATTGCTTATGGATCTTTTGAAGAACTAAGTAGAGGTGATTCTGTGACAAAACTACATTGTGACATTTCTGATGCGGTCAATATTCTGACACATACAGCTGAAGTAAAGATGCAACCATGGCAACCTAGAATCATAAAGAAATTACAGAAAAAGTATGAAGCTGAAGATATGCGAGAACTCTATGGCAAGTACAACAGGGCAATTGGTTCACGTGGAAGAAAACGCAAAATGTGCTGCAGTATTACCAGGAATCATAAAATTCCGGAAACAGAAGATGCTACTGGGAGACACTCTTCCTTACTTGGAAGTCAAAGAAAAGAAGAGGAACAAAACGAACAGCAGAGTGGACCCCTAAAAATGGGACTGTCAATATCTGATAAGGAAGCTTGTGTTCAAGGATTCTCAGAATCTACGAAAAATAAATTAAGCTTAAATGCTTGTGAGCAGGAAGTCCTCAATTTGAATTCAAGGCTTCCACACTTTGATCTCAATAATCATGATTCCAGTTGCATGTTTCCGGGAAAAGATGGTAAACAGTTGTGCTCATCATCAGCTGAAGGAGTTTCTTTATCAGAACATATGCAGTTTAAGACATGCACAAGTGATGATTGTGAAAAAGGACGAATGTCTGATACATGTTCTGTATTTGTTGATTTGAACCTCCCCACTCCACAAGTTAGGGTAAATGAGGAGCCGCAGAGAAATTACATCGAACAATCTGAAACCAAAAGCGTTCATTTTGAGGAGTTACCCTCCTATTCTGGGAAGAATGTTTCTGATTTACTCTTCCCTCAGAAGCAGTATTCTCACCACTATTTTTCTGTTTGTGGAAATGGGGCTGACAATACTAGCAATGTGCAAGATGAGACAGATACAGGTGGTGACTTCTCTCATGTTGAATATAATGGACAAGATCCTGATAATGATATTGGAGGATATCCAAACATTAGTGAAATCCGTCAGCCTTGTACTGTAACAGAAGATACCAAATTTTCCAATAGATTGAATTCTTTAGTCATGCCAGGTTCTGACATCAATGTTGACAAAATAAAGTCAGTTAAAAATGACACAAGTAATAATTTTTGTCAAAATGATGATCATTTGGAGACTCAATATGGGAGTGCTGTGTGGGACATATTCCGGAGGCAGGATGTACCCAAGCTAACCGAGTACCTAAAGAAACACCACAGAGAATTTCGCCACATAAATAATCTTCCAGTAAACTCAGTGATTCACCCCATTCATGATCAGATCCTTTACTTAAATGAGAAGCATAAAAAGCAATTAAAGCAGGAGTTTGGTGTTGAACCTTGGACGTTTGAGCAACACCTTGGGGAGGCTGTTTTCATACCAGCAGGATGCCCCCATCAAGTGAGAAATAGGAAGTCTTGCATAAAAGTGGCTCTGGACTTTGTTTCACCTGAGAATGTTCAAGAATGCATTCGATTGACAGAAGAATTTCGGTTACTTCCCAAAGGCCATAGATCTAAGGAAGATAAATTGGAGATAAAGAAGATGGCACTATATGCTGCTGATGTTGCAATAACCGAAGCCACTAAACTGATGAGAGGAAAATGA 6003 0.4175 MDDPGEENVFRRCNRRSSTGWRCKEGAMSGRNHCERHYLYMQQRTKSGKKRNASGGVGVRQKRRMKQRKNPEGELENGVVGDGGKELFDDHNGGPHVDEGHNDGVNLGLGFESFDLWGEGGGQHVNLGDFGGGFGNLSQVEGQVLGEPWSNGSTGGVFDAVQGGHASAGGVHICENDFLDLSSEDLQGLMVEADFGSLYDQGFQALLCQGGGCEEDVIFVGSDRAMPNFSAPVGPGLSGENAFEFRGEEVVGCAVNPGGHGKVEGETFGSIDVPVLNGRQQNGDTGSSSKMIVVGDEEGMERLLDGGVATSEDAKAVAFGPVAKGGRPNGSKNKDKQIHTTLNGQTVGANDEAGTNGTSSVTVLGSVSEAVDEGAVLNEIVRPMKSGQPKDSTGVSSVTVLESVSKAGDEGAGLGEFMRPKKRGRPMGNRMTNATFLESERSFKEDKAGDEGAGLGEIVRPRKRGRPKGLNMMNNVTGLEPERSVFSVEEGKAGDEGAGWGEIVRTKKCGRPKVSCWMGNVSVLKSERPLFSGEEDNTGEEGADGEIVRPKKRGRPKGSNKTSTTTVLESERPLFSGEEDKAGDEDADLGVIERIKKRGRPKGSGNKKNTFHVSNKLYVKIAGLKKLGQPKGSKGRKKIVVLVGNKFVGEIAVLQKRGRPKGSKNKIKNVVGNEAAGAGEIAVPKKLGRPKGSKGRKNNVVLVCEIAGPKKCGRPKGSKNKMKNVVEVGNEVAGRGDIAGPKKRGRPPKGSKKIQKIGEVNNEVAGAGEITRLKKRGRPKGSTKKWCTVVCASSKEVAGEIARYKNMPGEARNHFDKGAKKRGRPKGSNRKEKEFSYHFNSQIKRHGLVDEKEGRTSTEFASINDIDQKKRNYNQQRSFRITRQSISQSQSRGLKEQTPAANAIADENEPNGLTHRPPTNVRGQPLKKQKSTRFSEVLSRIMPQKHVQEECISMLEDQVNEVKKSGFLLESSEDPGNEKIKRAGLTCKTSNDQRRSSERLKALVIDEKNFQDVGGEESIYHGLESSALKGDTGMKKDARTLRCHQCWQKSRNGIVICTKCKRKRYCYECITKWYPDKTREEMETACPFCLGNCNCRLCLKEDISVVTGTGEADTEVKLQKLFYLLDKILPLLQNIQLEQRSELEVEASMHGSQLLEEEVVRSLIDDNERVYCDNCNTSIVNFHRSCPNPDCQYDLCLACCMETRIGLQCEEIPASGNEGADDTPPVTSAWRAEINGGIPCPPKARGVCGTTILSLKRLFEANWVEKLIKNVEELTIKYQPPNIDLSLGCSMCQSFEEDAVQNFVRKAASREISYGNFLYCPDAVKMGDTEFEHFQRHWIRGEPVIVRNVFEKGSGLSWNPMVMWRAFRGAKKILKEEAATFKAIDCLDWCEVEINIFRFFKGYLEGRRYRNGWPEMLKLKDWPPSNSFEDCLPRHGAEFVAMLPLSDYTHPKSGVLNLATKLPAVLKPDLGPKTYIAYGSFEELSRGDSVTKLHCDISDAVNILTHTAEVKMQPWQPRIIKKLQKKYEAEDMRELYGKYNRAIGSRGRKRKMCCSITRNHKIPETEDATGRHSSLLGSQRKEEEQNEQQSGPLKMGLSISDKEACVQGFSESTKNKLSLNACEQEVLNLNSRLPHFDLNNHDSSCMFPGKDGKQLCSSSAEGVSLSEHMQFKTCTSDDCEKGRMSDTCSVFVDLNLPTPQVRVNEEPQRNYIEQSETKSVHFEELPSYSGKNVSDLLFPQKQYSHHYFSVCGNGADNTSNVQDETDTGGDFSHVEYNGQDPDNDIGGYPNISEIRQPCTVTEDTKFSNRLNSLVMPGSDINVDKIKSVKNDTSNNFCQNDDHLETQYGSAVWDIFRRQDVPKLTEYLKKHHREFRHINNLPVNSVIHPIHDQILYLNEKHKKQLKQEFGVEPWTFEQHLGEAVFIPAGCPHQVRNRKSCIKVALDFVSPENVQECIRLTEEFRLLPKGHRSKEDKLEIKKMALYAADVAITEATKLMRGK 2000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00745 2000 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 1039 1109 IPR018866 -
Cca05g00745 2000 PANTHER ENBP1 PROTEIN 604 1998 - -
Cca05g00745 2000 MobiDBLite consensus disorder prediction 530 583 - -
Cca05g00745 2000 CDD cupin_RmlC-like 1887 1947 - -
Cca05g00745 2000 MobiDBLite consensus disorder prediction 411 430 - -
Cca05g00745 2000 MobiDBLite consensus disorder prediction 44 82 - -
Cca05g00745 2000 MobiDBLite consensus disorder prediction 810 833 - -
Cca05g00745 2000 Pfam JmjC domain, hydroxylase 1833 1946 IPR003347 -
Cca05g00745 2000 Gene3D Cupin 1808 1972 - -
Cca05g00745 2000 Gene3D Cupin 1317 1605 - -
Cca05g00745 2000 SMART cupin_9 1432 1963 IPR003347 -
Cca05g00745 2000 MobiDBLite consensus disorder prediction 883 931 - -
Cca05g00745 2000 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 604 1998 IPR045109 GO:0032454|GO:0033169
Cca05g00745 2000 MobiDBLite consensus disorder prediction 883 897 - -
Cca05g00745 2000 SMART AT_hook_2 550 562 IPR017956 GO:0003677
Cca05g00745 2000 SMART AT_hook_2 819 831 IPR017956 GO:0003677
Cca05g00745 2000 SMART AT_hook_2 420 432 IPR017956 GO:0003677
Cca05g00745 2000 SMART AT_hook_2 684 696 IPR017956 GO:0003677
Cca05g00745 2000 SMART AT_hook_2 656 666 IPR017956 GO:0003677
Cca05g00745 2000 SMART AT_hook_2 773 785 IPR017956 GO:0003677
Cca05g00745 2000 SMART AT_hook_2 461 473 IPR017956 GO:0003677
Cca05g00745 2000 SMART AT_hook_2 595 607 IPR017956 GO:0003677
Cca05g00745 2000 SMART AT_hook_2 709 721 IPR017956 GO:0003677
Cca05g00745 2000 SMART AT_hook_2 741 753 IPR017956 GO:0003677
Cca05g00745 2000 MobiDBLite consensus disorder prediction 913 931 - -
Cca05g00745 2000 SUPERFAMILY Clavaminate synthase-like 1331 1991 - -
Cca05g00745 2000 ProSiteProfiles Zinc finger RING-type profile. 1043 1089 IPR001841 -
Cca05g00745 2000 ProSiteProfiles WRC domain profile. 7 51 IPR014977 -
Cca05g00745 2000 MobiDBLite consensus disorder prediction 1561 1594 - -
Cca05g00745 2000 MobiDBLite consensus disorder prediction 734 753 - -
Cca05g00745 2000 ProSiteProfiles JmjC domain profile. 1451 1963 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00745 Cca-Chr5 20631729 20647616 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Cca05g00745 JmjC 2.1e-19 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00745 K15601 - gsj:114384813 2668.26