LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca05g00744	ATGAATTTCTTGGCCAAGGCAATGCAGAATCCCAACTTCGTTCAACAATTGGTTCAGCAAACAGAGTGGAGAAAGGAGCTTGAGGAAGCTTTTTCCAAGAAGAGGAGGAGACCTATTGAGCAAGGGCCTAGTGATGTTGTTGAAGTAGGTGACTTAGGTTGTGCTGAAGAGTCCTCAACTTTCGTTAAACTTGAACCTCAAGAGTGTACTGACAAGATATTAGAGTTTGAAGTACCTGATCTGGACTTTTATTCTTTGAATCTTGAGGAGAGTAGTGGAAGCCAAAAGAGAATCGAGGAAGACCATATCCAACTTGAAAGTAGAGATAATGATATTGATGAAGTGTTTTGGCAAGATTTGCTTAATGAGGGTATTAAACATCAAAGTGTTGAAGATGTAGATACACGACAAGCTGGTGCTGGAAATAAGGATTATGTTGCTGGCAAAGGCACAAAAGAGGTGCCTTCAGCTGCTGCTCCACTCGGTGAGGAGGTGGAAAAGGCTGCTGTCATCAAGCACGCAACAGGAGCACACGTAGCAGATAATTCTGCAATGGTTACTTTAGCTGCAGGTTTTCCAAATAATGCAGTAGCTGCTGGACATATAAATAATGGACAGCAAGGAGGTGATCCTGATCACGCAGAGGATGATGCAGCAGCTAATGTATCAGGCGGTGCTACCACAATTTACAAAGCAGATGATGTTGCTGCTGCTTTACTTTCCACGGAGCATGCTGCACCAGCCACTAAAGCCTTAGTTCCAACTGCTACTGCCAAAGTTGGTCCAGCAACCAGTTCAACAGCCCACTCAATAGGTGCACTCAACAAAGTTGATCCAGCTGATTTACAAATGCATCACGCTGCTCGGGTGCACATTGGTGCAGAAGAGCTTGCCACCCTTCAAGCCAATTTGATCAAGGCCTCAAAAGCCTATCATGATGCAGAAACTCCAGCTGGTAGATCAGCTGCTCTGTTGAACAAAACTATAGATGAATTTTGCGCCCTTAAGGACAATTGGATTAAAGATACAAATGCCTACAAGAATGCACTCCTGGTCAGTCAAGCTGACACAAATGAAGGAACTAATTCGGGTTCCTCAGTGTTGGAAAGGCTTTTCAGATTTATAATTGCGTCTCGTGTGGAGCAGGCAAATCGCAACCCCGGTGTAGCAGGCAAGTCGCAACCCCGGTGTAGCGTCGTCCACTGCAGCGATCAAATGGCTAAGGGTTCGCACGAATTTGGGCAAAGGGGTCTCACTGTGTCGTTGCTCCTCCTCCAAGGACCGTCGCTCCTAGACCAGTGCGTTTTGTTAGAGCGAAAAATCGCAACCCTAATTCAAAGTAATACAAAACCTCAGTCTTCAGTAACCCCTAACAATGTAGTTCAAATGCCACGTTTCTTCTATTTAGTTACCTACGAAATTTTTTCCGTAGATAACTAA	1440	0.4472	MNFLAKAMQNPNFVQQLVQQTEWRKELEEAFSKKRRRPIEQGPSDVVEVGDLGCAEESSTFVKLEPQECTDKILEFEVPDLDFYSLNLEESSGSQKRIEEDHIQLESRDNDIDEVFWQDLLNEGIKHQSVEDVDTRQAGAGNKDYVAGKGTKEVPSAAAPLGEEVEKAAVIKHATGAHVADNSAMVTLAAGFPNNAVAAGHINNGQQGGDPDHAEDDAAANVSGGATTIYKADDVAAALLSTEHAAPATKALVPTATAKVGPATSSTAHSIGALNKVDPADLQMHHAARVHIGAEELATLQANLIKASKAYHDAETPAGRSAALLNKTIDEFCALKDNWIKDTNAYKNALLVSQADTNEGTNSGSSVLERLFRFIIASRVEQANRNPGVAGKSQPRCSVVHCSDQMAKGSHEFGQRGLTVSLLLLQGPSLLDQCVLLERKIATLIQSNTKPQSSVTPNNVVQMPRFFYLVTYEIFSVDN	479

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca05g00744	479	PANTHER	HEAT STRESS TRANSCRIPTION FACTOR A-6B	1	131	-	-
	Cca05g00744	479	PANTHER	HEAT SHOCK TRANSCRIPTION FACTOR	1	131	IPR027725	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca05g00744	Cca-Chr5	20438650	20440654	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca05g00744	1	124	HSF	AT3G22830	37.931	5.82e-21	92.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca05g00744	K09419		-	gmx:100809515	189.504