Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00737 ATGGTTGTTCACGCTACAATCAAACTCCAAGTCAGTAGCATAGACTACGAAAATCACGAAATTGAGTTCACTGACCCTGAAAAGTGCCTTCCGAAGAAGTTTCAACAAATCAACAATTTTATCAATCGTTACAAATTTAAATCACCGTATTTGGAAGGAACAAACAACGAATTGATCTTCTTCAATTGTTCTTCACAAGAAATGATCTCATGTCCGATTTATGTTTCTTCTTCAGACTATAGTGTCTTCCAAATATTTGACAACATGGACCCATCTTGTACCAAGATGTTCGACGTTATCACGCCAATGAGTGCAGATATGATGCTATCGAATTCGGTTAATTTGAGATGGTCCAATCCAGGTTGTGCTAAGTGTGAAGCGCAAGGCAAGACATGTAAATGGAAGAGCAACAGCACAGAAGGAGACATGGAATGTTTTGACTGCAAGGGCAAAAAAGGAAACCATATGCTTCGATCGTTTCTTTTCACCACATGTTCGATTCTTTTGGGGCTGGTGGTCGTTGCCCTCATTAAGATCGCCCTCTATTTTAGAAGAAACGAAGAAGACCAAGCACGAGTGGAGAAGTTCTTAGAGGATTATAGGGCAGAAAATCCTGCAAGGTTTACCTATGCTGATTTGAAAAGAATCATCGATGGTTTTAAAGAAAAGCTAGGTGAAGGGGCTCACGGGACTGTGTTTAGAGGAAAACTTTCAAATGAGATTCTGGTGGCTGTGAAGATCCTTAATAACTCAAAAGGAGAATGGAAAGAGTTCATCAGTGAAGTGAGAATTATGGCCAAAATGCACCACATCAACATGGTTCGTTTGCTTAGTTCACTACAAGAAAATTACATATTAGCGAGGGAATATTCCCTCGTTATTTCTTCTCTGATTTCTCGCTAA 903 0.3953 MVVHATIKLQVSSIDYENHEIEFTDPEKCLPKKFQQINNFINRYKFKSPYLEGTNNELIFFNCSSQEMISCPIYVSSSDYSVFQIFDNMDPSCTKMFDVITPMSADMMLSNSVNLRWSNPGCAKCEAQGKTCKWKSNSTEGDMECFDCKGKKGNHMLRSFLFTTCSILLGLVVVALIKIALYFRRNEEDQARVEKFLEDYRAENPARFTYADLKRIIDGFKEKLGEGAHGTVFRGKLSNEILVAVKILNNSKGEWKEFISEVRIMAKMHHINMVRLLSSLQENYILAREYSLVISSLISR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00737 300 PANTHER RECEPTOR-LIKE KINASE 5 282 - -
Cca05g00737 300 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 282 IPR045874 GO:0004672
Cca05g00737 300 Pfam Protein tyrosine and serine/threonine kinase 220 281 IPR001245 GO:0004672|GO:0006468
Cca05g00737 300 Gene3D Phosphorylase Kinase; domain 1 190 290 - -
Cca05g00737 300 ProSitePatterns Protein kinases ATP-binding region signature. 224 246 IPR017441 GO:0005524
Cca05g00737 300 SUPERFAMILY Protein kinase-like (PK-like) 202 284 IPR011009 -
Cca05g00737 300 ProSiteProfiles Protein kinase domain profile. 218 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00737 Cca-Chr5 19910696 19918809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00737 183 277 Receptor kinase-like Gene Family AT1G66980 40.000 2.50e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Cca05g00737 PK_Tyr_Ser-Thr 1.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00737 - - gmx:100813645 340.887