Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00736 ATGGTAGAGTCCACTGTGCTGTCCCTGCAATGTGATTCCATATTGATCAAACTGTTGCTAATTCTCCTTCTTCTCGGTGGTGGCAGTGGTCACAACGAGTGCGAGGGAACGTCTTGTGGGCCTCAAGAACCTCTTATTAGGTTTCCTTTCCAACTCGTGAAGGGAATCGAAGATGGATGTGGTTATCCCCGCATTTGTCTACATTGTACGGGAAAAAATGAGACAATGCTTGTTCACGCTACAATCAAACTCCAAGTCAGTAGCATAGACTACGAAAATCACGAAATTGAGTTCACTGACCCTGAAAAGTGCCTTCCGAAGAAGTTTCAACAAATCAACAATTTTATCAATCGTTACAAATTTAAATCACCGTATTTGGAAGGAACAAACCACGACTTGAGCTTCTTCAACTGTTCTTCACAAGATATGATCTCGTGTCCGATTTATGTTTCTTCTTCAGACTATAGTGTCTTCCAAATATTTGACAACATGGACCCATCTTGTACCAAGATGTTCGACGTTATCACGCCAATGAGTGCAGATATGATGCTATCGAATTCGGTTAATTTGAGATGGTCCAATCCAGGTTGTGCTAAGTGTGAAGCGCAAGGCAAGACATGTAAATGGAAGAGCAACAGCACAGAAGGAGACATGGAATGTTTTGACTGCAAGGGCAAAAAAGGAAACCATATGCTTCGATCGTTTCTTTTCACCACATGTTCGATTCTTTTGGGGCTGGTGGTCGTTGCCCTCATTAAGATCGCCCTCTATTTTAGAAGAAAAGAAGAAGACCAAGCACGAGTGGAGAAGTTCTTAGAGGATTATAGGGCAGAAAATCCTGCAAGGTTTACCTACGCTGATGTGAAAAGAATCACCGGTGGTTTTAAAGAAAAGCTAGGTGAAGGGGCTCACGGGGCTGTGTTCAGAGGAAAACTTTCAAATGAGATTCTGGTGGCCGTGAAGATCCTTAATAACTCAGAAGGAGAAGGGACCGAGTTCATCAATGAAGTGAGAATTATGGGAAAAATGCACCACATCAACGTGGTTCGTTTGCTTGGTTTCTGTGCCGATGGAATCCATCGTGCTCTTGTCTACAGTTTGTTCCCGAAAGGTTCGCTACAAAGTTTCATATTTCCACCGGATGACAAGGACCGTTTCCTTGGCTGGGAGAAGCTACAACAAATTGCTATTGGCATAGCTAAAGGAATTGAGTATCTTCATCGAGGTTGTAACCATCCCATTATTCATTTTGTCATTAATCCTCACAACGTGTTGCTCGATGAAAACTTCACTCCAAAAATTTCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCTAGTTTGGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATACATTGCACCTGAAGTTTTCTCCAGGAACTTTGGAAATGTGTCTTATAAGTCTGATATCTATAGTTATGGAATGTTGTTGTTAGAAATGGTTGGAGGAAGCAAGAATTTGGACATGTCTTCTAAACAAGATTTCCATGTTCTGTACCCGGATTGGATCCATAATCTAGTTGATGGAGATGTACATATCCATGTTGAGGAAGAAGGTGATGTTAAAATTGCAAAGAAACTAGCTATTGTTGGACTTTGGTGCATTCAGTGGCGGCCAGTGAACCGTCCATCCATGAAATCTGTCATACAAATGCTAGAAACTGGAGAAGAACACGAGTTAACTGTGCCTCCTAATCCATTTAACTCAACAACTTCTACTTCTACCGGTGGACTCACTTCGTCAAAACAACCTTTGGAGTTGGAAGTCATTCAAGAATTAGAGAATGAATAG 1821 0.4185 MVESTVLSLQCDSILIKLLLILLLLGGGSGHNECEGTSCGPQEPLIRFPFQLVKGIEDGCGYPRICLHCTGKNETMLVHATIKLQVSSIDYENHEIEFTDPEKCLPKKFQQINNFINRYKFKSPYLEGTNHDLSFFNCSSQDMISCPIYVSSSDYSVFQIFDNMDPSCTKMFDVITPMSADMMLSNSVNLRWSNPGCAKCEAQGKTCKWKSNSTEGDMECFDCKGKKGNHMLRSFLFTTCSILLGLVVVALIKIALYFRRKEEDQARVEKFLEDYRAENPARFTYADVKRITGGFKEKLGEGAHGAVFRGKLSNEILVAVKILNNSEGEGTEFINEVRIMGKMHHINVVRLLGFCADGIHRALVYSLFPKGSLQSFIFPPDDKDRFLGWEKLQQIAIGIAKGIEYLHRGCNHPIIHFVINPHNVLLDENFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGSKNLDMSSKQDFHVLYPDWIHNLVDGDVHIHVEEEGDVKIAKKLAIVGLWCIQWRPVNRPSMKSVIQMLETGEEHELTVPPNPFNSTTSTSTGGLTSSKQPLELEVIQELENE 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00736 606 Gene3D Phosphorylase Kinase; domain 1 266 366 - -
Cca05g00736 606 MobiDBLite consensus disorder prediction 573 595 - -
Cca05g00736 606 PANTHER RUST RESISTANCE KINASE LR10-RELATED 21 602 IPR045874 GO:0004672
Cca05g00736 606 SUPERFAMILY Protein kinase-like (PK-like) 277 563 IPR011009 -
Cca05g00736 606 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Cca05g00736 606 Gene3D Transferase(Phosphotransferase) domain 1 368 573 - -
Cca05g00736 606 Pfam Protein tyrosine and serine/threonine kinase 295 562 IPR001245 GO:0004672|GO:0006468
Cca05g00736 606 MobiDBLite consensus disorder prediction 569 595 - -
Cca05g00736 606 ProSiteProfiles Protein kinase domain profile. 293 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00736 606 Pfam Wall-associated receptor kinase galacturonan-binding 34 99 IPR025287 GO:0030247
Cca05g00736 606 PANTHER RECEPTOR-LIKE KINASE 21 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00736 Cca-Chr5 19890609 19892522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00736 39 576 Receptor kinase-like Gene Family AT5G38260 34.134 7.99e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Cca05g00736 PK_Tyr_Ser-Thr 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00736 - - gmx:100813645 842.802