Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00726 GTAAGGAGTGTGGAAGTAAAGGAAGCTCTGCGCCTTCAGAAAGAAAATAACTTTGTGTTGCTTGATGTAAGGCCAGAAGCACAGTTCAAAGAGGCACATCCTCCAGGTGCAATCAATGTGCAAGTATATAGACTAATAAAAGAGTGGACAGCATGGGACATTGCTAGGCGTGCTGCATTTGCATTTTTTGGCATTTTTGCTGGTACAGAAGAGAACCCTGAGTTCATCAAGAATGTTGAAGCAAAACTAGATAAAAGTGCAAAGATAATAGTCGCTTGCTCTTCAGGGGGTACATTGAGACCATCACAAAATTTGCCTCAGGGACAACAATCAAGGTCACTTATAGCAGCATACTTGCTGGTTCTTAACGGTTATACGAATGTCTTTCATCTAGAAGGTGGTCTTTACACATGGTTAAAAGAGGGACTGCCAACTGTTTCAGAAGAGTGA 450 0.4178 VRSVEVKEALRLQKENNFVLLDVRPEAQFKEAHPPGAINVQVYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIKNVEAKLDKSAKIIVACSSGGTLRPSQNLPQGQQSRSLIAAYLLVLNGYTNVFHLEGGLYTWLKEGLPTVSEE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00726 149 Gene3D - 1 145 IPR036873 -
Cca05g00726 149 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 1 149 - -
Cca05g00726 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 2 146 IPR036873 -
Cca05g00726 149 Pfam Rhodanese-like domain 6 140 IPR001763 -
Cca05g00726 149 SMART rhod_4 4 144 IPR001763 -
Cca05g00726 149 ProSiteProfiles Rhodanese domain profile. 14 147 IPR001763 -
Cca05g00726 149 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 1 149 IPR043186 -
Cca05g00726 149 CDD RHOD 8 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00726 Cca-Chr5 19427767 19449477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00726 1 149 Sulfurtransferasese or Rhodanese AT4G27700 80.795 1.47e-91 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00726 - - gmx:100792221 271.937