Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g00673 | ATGTCCCTTGAAGAGTCGCTAAGATCTCTGCCGCTGGATTACCTGAACCTCCTCATCAACGGCCAGGCCTTCAGCGACGTCACTTTCAGCGTGGAGGGACGTCTGGTTCACGCGCACCGCTGCATACTGGCCGCGCGGAGCCTCTTCTTCAGGAAATTCTTCTGTGGGCCGGACCCACCCTCTGGCCTGGACCCCACCGGCCCAAGGATCAACTCGCGCTCCGGAGTCATACCCGTCAACTCCGTCGGCTCCGAGGTCTTCCTCCTCATGCTCCAGTTTCTCTACAGTGGCCTGGGGTGCGGGAGAACGGGGGGTGTGGGGTGCGGGAAGGAGGTGGGGAAGGTATGTAAATTTAGGAATTTTTATTTTTTTTAA | 375 | 0.5787 | MSLEESLRSLPLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPTGPRINSRSGVIPVNSVGSEVFLLMLQFLYSGLGCGRTGGVGCGKEVGKVCKFRNFYFF | 124 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g00673 | 124 | SUPERFAMILY | POZ domain | 10 | 97 | IPR011333 | - | |
Cca05g00673 | 124 | SMART | BTB_4 | 25 | 123 | IPR000210 | GO:0005515 | |
Cca05g00673 | 124 | Pfam | BTB/POZ domain | 16 | 97 | IPR000210 | GO:0005515 | |
Cca05g00673 | 124 | ProSiteProfiles | BTB domain profile. | 25 | 97 | IPR000210 | GO:0005515 | |
Cca05g00673 | 124 | PANTHER | REGULATORY PROTEIN NPR5 | 1 | 97 | - | - | |
Cca05g00673 | 124 | Gene3D | Potassium Channel Kv1.1; Chain A | 7 | 99 | IPR011333 | - | |
Cca05g00673 | 124 | PANTHER | BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 | 1 | 97 | IPR044284 | GO:0099402 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g00673 | Cca-Chr5 | 16998403 | 16998777 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Cca05g00673 | BTB | 7e-14 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g00673 | K14508 | - | ccaj:114915492 | 223.787 |