Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00647 ATGGATGGCGGCAAGTGGGGCGGCGCCGGCGTTATGACGGCGGCGCACATCGACGACTTTAAGTGGATCGCGTCGATCCTCGACCCCGAAATCTCAAACGACGACGTCAAACCTTGCAAGTCCGATCCCTTCACCTCTCACCTCAACCAAGCTTTCCAAAATCTGGATGCAGTAACAGCATTTTCGACTACATGTGGTGGAACAGGAGTAACAGATGATACCTTTGTTTGCTCCCAAAACCTCACTCCCTTGCAATCCACCATCTCTGCAACTATTGATTCTCAGTCCTCTATTTGTGGTACTGTTGGGAGCCCAGTGTCTGCAAACAAACCAAACAGCACAGAAAATGAAAAAGTCAAAGGAAACACAACAACAAGTGGTTCCTCACGTGACCCATCTGATGAAGATGAAGCAGGCACTAACGCTATTGATATAAAACGTCTCAGAAGGAAGTTTTCTAATCGCGAGTCTGCAAGGAGGTCCAGAAGAAGAAAACAAGCCCATTTGGCTGACCTCGAGTGGCAAGTTGAACGGCTGAGACTGGAAAATGCAAACCTATTTAAGCAGCTTACAGATGCAAGCCAACAATTTCGTGAGGCTGATACGAATAATCGAGTCCTAAAATCTGATGTCGAAGCTTTGAGAGCTAAGGTTAAGTTAGCTGAGGATATGGTCACTCGGGGCTCACTCCCTTTTAGCAATCAGCTTCATCAAAATCAGTGTCAATTAGGCACCCCACCACAGCTCAACACGAATAGTACTCTACGTGGCATGGCACATGTTTCACCAACCATCACCATCCAAGGGAATAATAACAATGATGCTTCATATGGTGCTGCTGGAATCACAGTTAGTAGCTTGGATATACCTTGCAATGATTTCAATAACGATAATGTTGTGAGCTCTATGACTACCTTGTGGCCTTAA 927 0.4595 MDGGKWGGAGVMTAAHIDDFKWIASILDPEISNDDVKPCKSDPFTSHLNQAFQNLDAVTAFSTTCGGTGVTDDTFVCSQNLTPLQSTISATIDSQSSICGTVGSPVSANKPNSTENEKVKGNTTTSGSSRDPSDEDEAGTNAIDIKRLRRKFSNRESARRSRRRKQAHLADLEWQVERLRLENANLFKQLTDASQQFREADTNNRVLKSDVEALRAKVKLAEDMVTRGSLPFSNQLHQNQCQLGTPPQLNTNSTLRGMAHVSPTITIQGNNNNDASYGAAGITVSSLDIPCNDFNNDNVVSSMTTLWP 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00647 308 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 144 207 IPR004827 GO:0003700|GO:0006355
Cca05g00647 308 MobiDBLite consensus disorder prediction 103 141 - -
Cca05g00647 308 CDD bZIP_plant_GBF1 160 198 IPR045314 GO:0003700|GO:0006355
Cca05g00647 308 SUPERFAMILY Leucine zipper domain 146 196 IPR046347 GO:0003700|GO:0006355
Cca05g00647 308 MobiDBLite consensus disorder prediction 103 129 - -
Cca05g00647 308 Coils Coil 204 224 - -
Cca05g00647 308 Coils Coil 162 196 - -
Cca05g00647 308 PANTHER BASIC LEUCINE ZIPPER 63 40 307 - -
Cca05g00647 308 Pfam bZIP transcription factor 145 193 IPR004827 GO:0003700|GO:0006355
Cca05g00647 308 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 149 164 IPR004827 GO:0003700|GO:0006355
Cca05g00647 308 PANTHER BASIC LEUCINE ZIPPER 9 40 307 - -
Cca05g00647 308 SMART brlzneu 142 206 IPR004827 GO:0003700|GO:0006355
Cca05g00647 308 Gene3D - 145 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00647 Cca-Chr5 15732621 15741831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00647 93 270 bZIP Transcription Factor Family AT5G24800 53.125 1.07e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca05g00647 bZIP_1 9.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00647 K25784 - gmx:100776831 382.874