Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00644 ATGTCTATGGATCCAAAGAAATCTAACAAGATCAGAGAAATTGTTAGACTTCAACAGATCCTCAAGAAATGGAGAAGGATAGCCAACTCATCGAAAACCACCACCACTGGCACTGCTTCCTCCACCACTACCAGCAAGAGCATGAAGTTTCTAAAGAGGACACTTTCCCTATCCGAACGTGAAGGAGGGTCAAACAACGTTGTCCCAAAAGGGTACCTAGCTGTTTGTGTTGGTGAAGAGATGAAGAGGTTCACTATTCCAACTGAATATTTAGGTCACCAAGCCTTTGAGATTCTGCTGAGAGAAGCAGAAGAAGAATTTGGGTTTCAACAAACGGGTGTTCTGAGGATTCCTTGTGAAGTGGCTGTGTTTGAGAGTATCTTGAAGATGGTGGAAGGAAAGGAGGACAAGTTTTCCTCTCAAGAATGTAGACTCAGCATTGAAGAGATCATGATGGGGTACTGCACAGAAAACCAACTTGCTTATTCTCACCATCCTCAAAGTCCATTGTGCAGATAG 519 0.4335 MSMDPKKSNKIREIVRLQQILKKWRRIANSSKTTTTGTASSTTTSKSMKFLKRTLSLSEREGGSNNVVPKGYLAVCVGEEMKRFTIPTEYLGHQAFEILLREAEEEFGFQQTGVLRIPCEVAVFESILKMVEGKEDKFSSQECRLSIEEIMMGYCTENQLAYSHHPQSPLCR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00644 172 PANTHER SAUR FAMILY PROTEIN 7 172 - -
Cca05g00644 172 Pfam Auxin responsive protein 23 131 IPR003676 GO:0009733
Cca05g00644 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 172 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00644 Cca-Chr5 15396127 15396795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00644 3 172 Calmodulin-binding Proteins AT2G24400 54.645 3.10e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00644 K14488 - gmx:100779842 291.967