Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00631 ATGTGGCTGCAAAAGAATCACCACGACAAGAAGGAAGGGGTCAATGGAATAGTGGCAGTGGCAATAGATTCAGACAAGGGGAGCCAGAATGCACTCAAATGGACCATTGATCATCTCCTCAGCAAAGGCTCAAATTTAGTTCTCATTCATGTCAAGCCAAAGCATTCTTCTCTTTCTGCAACAACTTCTCTTGTAACTCCAAGGCTAGGGACACATAGTATTGTTGAGAAGTTTACACTTGTTTGCAAGGACCCAGATGAGCAAACAAGAGAAATTTTTCGGCCATATCGTGTATTTTGTGCAAGGAAAGATATACACTGCAAGGACGTTGTACTAGAAGATGTGGACGTATCCAAAGGCTTAATTGAATATGCTTCTCAATATGCAATTGAGCATTTGGTCATTGGCTCTTCAAACAAAGGTGGTTTTCTTAGAAGATTCAAGGTAGCAGATATTCCTGGAATAGTATCAAAAGGAGCACCAGATTTCTGCACAGTATATGTTGTTGCCAAAGGGAAGATTCAATCCATGAGATCAGCTTCTCGTGCTGCTCCTGCCTTTTCCCCTCTTCAAAGCCAACTTAGTCAACCCAATGTTAGGTCAGACCATTCAGAATCACGTGTGCCTCTGGCCAATAGTGCCAAAGGACTTGAAAGGAGGTCTTTTGAGACACCAGCACCACCCCGTAGATCACAGGAAGGAACAGACTTCTTCAGGTCACCACTGACTAGGAAAGGTGTGAATGATAGGTCATATGCGGAAATTTCGTTGCCAGATACTGACATAAGCTTTGTAAGCTCTAGAAGGTCAAGTACAGATCGCTTATTCCCTTCATTACAGAGCAACAACAACCACAACTCAGAGACATCTATGTCAAATCCCCGGATGTCATATAGCTCTGACATAGATGGAAATAATTATAGCTTTGAATCTGTGCATTTTGGAAGAAGGTCTATGGATATCAACTCTGATTTCTCATCATTCTCACAAGAAAGTGATGGCTTCTCCTCTACATCACAGGGCATGGATGATGTGGAGGCTGAAATGAGAAGACTGAAGTTGGAGCTTAAGCAAACAATGGAAATGTATAGCAATGCCTGCAAAGAAGCACTCACAGCACAACAAAAGGCTGTGGAACTCCAGCGATGGAAATTAGAGGAAGAGAGGAGATTGGAGGAGGCAAGGCTCGCTGAAGAAGCTGCATTGGCAATCGCAGAGAAGGAGAAGGCGAGATCAAAAGCAGCCGTTGAGACTGCTGAGGCACAAAAGAGAATTGCAGAACTGGAAGCACAAAAGAGAATCAATGCAGAAATGAAAGCATTTAGAGAATCAGAAGAGAAAAGAAAAGCATTTGATGCTTTTTCAAATAGTGTGAGGTATAGAAGGTACACAATTGAGGAGATTGAAGCTGCAACAAATTTTTTTAGTGAGTCACTGAAGATTGGAGAAGGGGGTTATGGTCCAGTTTATAAGTGCCATTTGGACCATACACCTGTGGCAGTGAAGGTTCTACGTCCTGACGCAGCTCAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTACTGAGTTGCATTCGGCATCCAAACATGGTTCTCCTCCTAGGAGCCTGCCCTGAGTATGGCTGCCTTGTGTACGAGCACTTGACAAATGGAAGCTTAGACGATCGCCTCTTCTGTCGAGGAAACACTCCCCCGATTCCATGGCAGCTGAGGTTCAAAATTGCGGCCGAAATCGGCACAGGCTTGTTGTTCCTCCACCAGACCAAACCTGAGCCTCTTGTGCACAGAGACCTTAAACCAGCCAACATCTTGCTAGACAGAAACTATGTGTCCAAGATCAGTGATGTAGGTTTGGCCAGGCTGGTTCCACCCTCTGTAGCAGACAATGTGACACAGTATAGAATGACATCTGCTGCTGGAACATTCTGTTACATAGACCCTGAGTACCAGCAGACAGGAATGCTGGGAGTGAAATCTGACATATACTCTCTTGGTATCATTTTCTTGCAAATTTTGACAGCAATGGCTCCAATGGGTTTGACACATTATGTTGAGAGGGCCATTGAGAAGGGCACATTTGCTGATATGTTGGATTCAAAAGTGCCTGACTGGCCAGTGGAGGAGGCCTTGATCATGGCAAAGATTGGTCTCAGATGTGCTGAACTTAGGAGGAGAGACAGACCTGATCTTGGCAAGGAAGTGCTACCTGAACTAAACAGGCTTAGAGAACTTGCTGAAAACAATGATCAGTGTTCAATGTTTAGTGGCTATTATAGCCCATCCAATCAGAGCCAAGTTTCTCTTCAGCTGGATGGATCCAGTTCTCCACTTCCTTATTCTGGGTAG 2346 0.4437 MWLQKNHHDKKEGVNGIVAVAIDSDKGSQNALKWTIDHLLSKGSNLVLIHVKPKHSSLSATTSLVTPRLGTHSIVEKFTLVCKDPDEQTREIFRPYRVFCARKDIHCKDVVLEDVDVSKGLIEYASQYAIEHLVIGSSNKGGFLRRFKVADIPGIVSKGAPDFCTVYVVAKGKIQSMRSASRAAPAFSPLQSQLSQPNVRSDHSESRVPLANSAKGLERRSFETPAPPRRSQEGTDFFRSPLTRKGVNDRSYAEISLPDTDISFVSSRRSSTDRLFPSLQSNNNHNSETSMSNPRMSYSSDIDGNNYSFESVHFGRRSMDINSDFSSFSQESDGFSSTSQGMDDVEAEMRRLKLELKQTMEMYSNACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKARSKAAVETAEAQKRIAELEAQKRINAEMKAFRESEEKRKAFDAFSNSVRYRRYTIEEIEAATNFFSESLKIGEGGYGPVYKCHLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHLTNGSLDDRLFCRGNTPPIPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAMAPMGLTHYVERAIEKGTFADMLDSKVPDWPVEEALIMAKIGLRCAELRRRDRPDLGKEVLPELNRLRELAENNDQCSMFSGYYSPSNQSQVSLQLDGSSSPLPYSG 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00631 781 PANTHER OS02G0152300 PROTEIN 11 774 - -
Cca05g00631 781 ProSiteProfiles Protein kinase domain profile. 475 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00631 781 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 147 - -
Cca05g00631 781 MobiDBLite consensus disorder prediction 274 297 - -
Cca05g00631 781 CDD STK_N 17 172 - -
Cca05g00631 781 MobiDBLite consensus disorder prediction 186 243 - -
Cca05g00631 781 Gene3D Transferase(Phosphotransferase) domain 1 548 758 - -
Cca05g00631 781 MobiDBLite consensus disorder prediction 186 208 - -
Cca05g00631 781 Gene3D Phosphorylase Kinase; domain 1 453 547 - -
Cca05g00631 781 SUPERFAMILY Protein kinase-like (PK-like) 453 730 IPR011009 -
Cca05g00631 781 Gene3D HUPs 17 155 IPR014729 -
Cca05g00631 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Cca05g00631 781 SMART serkin_6 475 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g00631 781 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 11 774 - -
Cca05g00631 781 Coils Coil 342 431 - -
Cca05g00631 781 Pfam Universal stress protein family 18 146 IPR006016 -
Cca05g00631 781 Pfam Protein kinase domain 477 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00631 Cca-Chr5 14868423 14877133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00631 1 768 Receptor kinase-like Gene Family AT1G78940 57.052 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Cca05g00631 Pkinase 9.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00631 - - gmx:100779981 1244.57