Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00622 ATGGAAGGTTCTAGAATAGAGAACTTGATTAATGCCAAGAAGTCCCTGAAGCTTAGCTTAGAGAAATCAAAGTCGGTAGGTTTAGCGTTAGAGAAAGCCGGCCCGAGGTTAGGCGAAATCCGGCAGCGGCTCCCGTCTCTGGGGGCGGCGGTGCGGCCGATTCGCGCTGACCGCGACGCGCTGGCCGCGGTCGGCGGCCACATCAACCGCGCCGTGGGCCCCGCCGCGGCGGTGCTCAAGGTTTTCGACGCCGTTCACGGCCTCGAAAAATCGCTCCTGTCGGACCCCCGGTCCGACCTCGCCGGCTACCTCTCGGTGCTGAAGCGCCTGGAGGAGGCGCTGAGGTTTTTGGGGGACAATTGTGGTTTGGCAATTCAGTGGTTAGAGGATATAGTTGAGTATTTGGAGGATAATTCTGTTGCTGATCAGGTTTATCTCGCGAGTTTGAAGAAGGAATTGAAGAATCTCCGTGAGTTTCAGCACGGGGAGCTCGATGGAGGGTTGTTGGATGCTGCATTGTTTAAGTTGGAGGATGAATTCAGGTTGTTGTTGACTGAGAATAGTGTGCCGTTGCCGATGTCGGCCGCTGCTGCGGCCGGCGATCAGGCGTGCATTGCGCCGTCACCGCTGCCGGTGCCGGTCGTGCACAAGCTGCAGGCGATCCTTGGGAGGTTGATTGCCAATGAGAGGCTTGATAGGTGTGTGGGGATTTATGTTGAGGTGAGGAGTTCCAATGTGAGGGCGAGTTTGCAGGCGCTGAATTTGGATTACCTTGAGATTTCGGTTTCGGAGTTCAATGATGTGCAGAGCATTGAGGGGTATATTGCTCAGTGGGGGAAGCATTTGGAGTTTGCGGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGCAATGATGTGTTTGAGAGGATTGGGTTGGATGTGTGGATGGGTTGCTTTTCGAAGATAGCTGCGCAGGCTGGTATACTTGCGTTTCTTCAGTTTGGGAAGACGGTCACGGAGAGTAAGAAGGACCCCATTAAGCTTTTGAAGTTGTTGGATATTTTTGCATCGTTGAACAAGTTGAGGCTGGATTTCAACCGGCTTTTCGGCGGGGCGCCGTGTGCTGAGATACAGAATTTGACGAGGGATCTTATTAAGAGAGTGATTGATGGGGCTGCTGAGATTTTCTGGGAGCTTTTGGTTCAGGTGGAGTTGCAGAGGCAGAATCCGCCGCCGATGGATGGCAATGTGCCAAGATTGGTGAGCTTTATCACTGATTACTGTAACAAGCTCCTTGGGGAGGACTACAAGCCGATATTGACTCAGGTCCTGATCATTCACAGAAGTTGGAAGCGCCAAAGCTTTCAGGAGAGACTCCTTGTTGATGAGGTTTTGAATATAGTGAAGGCTGTTGAACAGAACGTGGAGACTTGGATCAAGGCTTATGGTGATTCTGATTCTACACTGTCCAACTTTTTTGCTATGAACAATCACTGGCATCTGTGCAAGCATTTGAAAGGGACAAAGCTTGGGGAGCTGTTGGGGGATTCTTGGTTAAGGGAGCATGAACAGTATAAGGACTATTACTCCACAATCTTCTTGAGGGACAGCTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGCTGATTCTTTTCTCGGGAGGGCGCGCCACTGCCCGTGACCTGGTCAAGAAAAGGTTGAAGAAATTCAATGAAGTTTTTGATGAGATGTATACAAAGCAGTCAAGTTGGGTCATGCCAGAACAAGATCTGAGGGAGAAGACATGTCAGCATATAGTGCAAGCAGTGGTGCCTGTTTACCGCAGTTACATGCAGAATTATGGTCCTTTGGTTGAGCAAGATACTAGCTCCACAAAATATGCAAAGTACACAGTGCAGAAGCTGGAGGAAATGCTTTTGTGTCTCTATCGGCCGAAGCCTGTAAGACATGGCAGCTTGAGAAGTCCGACATTTAATGCAAAATATGGCAATGGAGTACCTGATCTTCGTAGAACAGCATCTGCAGTTGTGTAA 2019 0.5007 MEGSRIENLINAKKSLKLSLEKSKSVGLALEKAGPRLGEIRQRLPSLGAAVRPIRADRDALAAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRSDLAGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLEDNSVADQVYLASLKKELKNLREFQHGELDGGLLDAALFKLEDEFRLLLTENSVPLPMSAAAAAGDQACIAPSPLPVPVVHKLQAILGRLIANERLDRCVGIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAPCAEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNPPPMDGNVPRLVSFITDYCNKLLGEDYKPILTQVLIIHRSWKRQSFQERLLVDEVLNIVKAVEQNVETWIKAYGDSDSTLSNFFAMNNHWHLCKHLKGTKLGELLGDSWLREHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWVMPEQDLREKTCQHIVQAVVPVYRSYMQNYGPLVEQDTSSTKYAKYTVQKLEEMLLCLYRPKPVRHGSLRSPTFNAKYGNGVPDLRRTASAVV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00622 672 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 661 - -
Cca05g00622 672 SUPERFAMILY Cullin repeat-like 78 638 IPR016159 -
Cca05g00622 672 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 661 IPR004140 GO:0000145|GO:0006887
Cca05g00622 672 Gene3D Exocyst complex component Exo70 128 645 - -
Cca05g00622 672 Pfam Exo70 exocyst complex subunit 277 634 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00622 Cca-Chr5 14590996 14593014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00622 6 672 EXO70 exocyst subunit family AT4G31540 74.374 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00622 K07195 - gmx:100796139 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00622 05 14590996 14593014 Cca05g00622 05 14590996 14593014 ECH