Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00616 ATGGAAGCCTGCTCATGTTCAATGTTTAGACAATCTAGACATTTTTCTCCAGGCTTTTTGATACTCCAGTTTTGTATGGTATTCATTGATGAATTAGATGCAATTGCCCCTGCAAGGAAAGATGGGGGTGAAGAGCTATCTCAAAGATTGGTTGCAACTTTATTGAATCTAATGGATGGAATTAGCAGAACTGAAGGGCTACTTGTAATTGCTGCCACTAACCGGCTTGACCATATTGAGCCAGCTCTCAGACAACCAGGAAGATTTGACAAAGAAATTGAAATTGGTATGAACTAA 297 0.3939 MEACSCSMFRQSRHFSPGFLILQFCMVFIDELDAIAPARKDGGEELSQRLVATLLNLMDGISRTEGLLVIAATNRLDHIEPALRQPGRFDKEIEIGMN 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00616 98 PANTHER - 26 97 - -
Cca05g00616 98 Pfam ATPase family associated with various cellular activities (AAA) 23 96 IPR003959 GO:0005524|GO:0016887
Cca05g00616 98 PANTHER AAA-FAMILY ATPASE 26 97 - -
Cca05g00616 98 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 96 IPR027417 -
Cca05g00616 98 Gene3D - 5 97 IPR027417 -
Cca05g00616 98 CDD AAA 23 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00616 Cca-Chr5 14385096 14385515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00616 8 97 Calmodulin-binding Proteins AT3G56690 68.889 5.20e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00616 - - gmx:100788600 131.339