Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00576 ATGGCATACCAAAACCCTCCTTCAATTCCAATCACAGATCCTGAAGCACCGGAAATAACTCCTACTACTCTTGCTCCTACCACTCCACCAGCCTCAAGTTTCTCAACCAAAGTGGTGGTGAACAAGGTGAAAAGCAACTTGATTTTTCACTCAAAATGGGCTGAACTCAATGGTGCCATGGGTGACCTAGGCACTTACATACCAATAGTATTGGCCTTGACCCTAGCTAGGGACCTCAACCTTGGCACCACGTTGATCTTCACAGGTGTGTACAACATCATTACTGGTGCCATTTATGGGGTCCCTATGCCGGTCCAGCCCATGAAGTCCATTGCCGCCCAGGCCTTATCCGACACCGCCTTCGGCGTGCCGGAGATCATGACTGCCGGCATATTAACCGGTGGCGTGTTGTTTGTTTTGGGTGTCACAGGGTTGATGCAGCTTGTGTATAAGCTGATTCCCCTCAGTGTTGTGAGGGGAATTCAACTGGCACAAGGCTTGTCATTTGCCTTGACAGCAGTTAAGTACGTGAGGAAAGTTCAAGACTTGCCAAAGTCTAAGTCTTTGGGTCAGAGGCATTGGTTTGGCTTGGATGGGTTGGTTTTGGCCATTGTTTGTTTGTGTTTCATTGTGATTGTGAATGGGGCTGGAGAGAATAAGAATAGAGGGTGTTGTGATGCTGTGGGAAGTGGTAATGATGATGATTTGGGTGGCCAAAAGAGGGTTGAGTGTGATGAAAGAAACAAGAGAAGCAGGTTGAGGAAGGTTATTTTCTCACTACCTTCTGCTTTCATTGTGTTTGTGTTGGGTGTTGTTTTGGCCTTTATAAGAAGACATGAGGTGGTGCATGAAATTAAGTTTGGTCCTTCCTCTATAGAAGTGGTGAAGTTCTCTAGACATGCATGGAAGAAAGGGTTTGTGAAGGGTGCAATTCCCCAACTTCCCTTATCAATTTTGAACTCTGTGGTAGCTGTTTGCAAGTTGTCATCAGATTTATTCCCAGGGAAGGATTTCTCAGTCACTTCACTTTCAGTGACAGTGGGGTTGATGAACTTGGTTGGTAGTTGGTTTGGTGCAATGCCAAGTTGCCATGGTGCTGGTGGACTTGCAGGGCAGTATAAATTTGGTGGAAGGAGTGGGGGGTGTGTGGCACTTCTTGGTGCTGCAAAATTGTTGTTGGGATTGGTGTTGGGAAGTTCTTTGGCACACATTTTAAAGCAGTTTCCTGTGGGAATTTTAGGGGTGTTGCTCCTATTTGCTGGAATTGAACTAGCCATGTGCTCTAGGGACATGAATACAAAAGAAGATTCCTTTGTGATGCTTATTTGCACTGCTGTTTCACTTGTGGGGTCAAGTGCAGCTCTTGGCTTTTTATGTGGAATGGTTGTTTATGTGCTTCTTAGGCTGAGGAATTGGACCAGGGATAAACCACTTTCTACTATTTGGATGCAGAAAAGTCCTCAGCAAGTATGA 1473 0.4569 MAYQNPPSIPITDPEAPEITPTTLAPTTPPASSFSTKVVVNKVKSNLIFHSKWAELNGAMGDLGTYIPIVLALTLARDLNLGTTLIFTGVYNIITGAIYGVPMPVQPMKSIAAQALSDTAFGVPEIMTAGILTGGVLFVLGVTGLMQLVYKLIPLSVVRGIQLAQGLSFALTAVKYVRKVQDLPKSKSLGQRHWFGLDGLVLAIVCLCFIVIVNGAGENKNRGCCDAVGSGNDDDLGGQKRVECDERNKRSRLRKVIFSLPSAFIVFVLGVVLAFIRRHEVVHEIKFGPSSIEVVKFSRHAWKKGFVKGAIPQLPLSILNSVVAVCKLSSDLFPGKDFSVTSLSVTVGLMNLVGSWFGAMPSCHGAGGLAGQYKFGGRSGGCVALLGAAKLLLGLVLGSSLAHILKQFPVGILGVLLLFAGIELAMCSRDMNTKEDSFVMLICTAVSLVGSSAALGFLCGMVVYVLLRLRNWTRDKPLSTIWMQKSPQQV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00576 490 Pfam Molybdate transporter of MFS superfamily 306 424 IPR031563 GO:0015098|GO:0015689
Cca05g00576 490 Pfam Molybdate transporter of MFS superfamily 54 169 IPR031563 GO:0015098|GO:0015689
Cca05g00576 490 PANTHER - 25 485 IPR031563 GO:0015098|GO:0015689
Cca05g00576 490 MobiDBLite consensus disorder prediction 1 29 - -
Cca05g00576 490 PANTHER MOLYBDATE TRANSPORTER 1/2-RELATED 25 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00576 Cca-Chr5 13350108 13352294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00576 28 479 Inorganic Solute Cotransporters AT2G25680 66.520 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00576 - - gmx:100784982 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00576 05 13350108 13352294 Cca05g00576 05 13350108 13352294 ECH
Cca05g00576 05 13350108 13352294 Cca03g01510 03 33712862 33714469 PCT