Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00538 ATGTCCGAAGTAGACAGCGATCTGGACGAGCACCTCCAGAATCTGATAGAGCGCTCTCCCTTGAACTGGACCTACGCAATCCTCTGGCGATGCTCCTCTCCCCGCTCCCTCCTGTCCTTCCACCGCGGCTACTGCAGGACCACCGGAAAGCCCCGCCACCTTCGCATCCTGGGATCGCGCATCACCGCCGCCGAATCGCTCAGCGACGCGGAGTGGTTCTTCAGAATCTCGGCGGCGCAGTCCTTCCGCGTGGACGAGGACTTGCCCGGCCACGCTCTCTGGGGTTCCAGCCCGGTGTGGGTGAGCGCAGGGGATTCGGAGGGTCCGCGGTGGGAGAGGGCCGCCTGGGGGAAACAGTTCGGGATTCGCACGTTTCTCTGCGTGCCCCTCAAGGAGAGAGACGTCTTGGAGTTGGCTTCCACGCAGATCGTAGCGTCGCCTCTCAAGGAGAGAGACGTGTTGGAGTTGGCTTCCCCGCAGATCGAAGCGTCGCCGTTTCATGTTATTAAAGTCATGGCCGATTTCATTTATCCCATTGGCCTTCCTCGCCTCTCTCCCATTGAGCCTCATCTTCTGAAACAATTCAGGAATGATAAAAAGTTGCATGAAAGAGCAGTTAATGACATGCAGAATAGTTGGAACGACAACTTATCTAAGCAATCTCGAGGCAAAGAGAAGATAAGTGATTCAAAATGCTCTTGGCCATTGTTAACAGAGATGTCTGATAGAACATTTTCATACTCACACGACTATTCCGGTCCCTCATGA 768 0.5508 MSEVDSDLDEHLQNLIERSPLNWTYAILWRCSSPRSLLSFHRGYCRTTGKPRHLRILGSRITAAESLSDAEWFFRISAAQSFRVDEDLPGHALWGSSPVWVSAGDSEGPRWERAAWGKQFGIRTFLCVPLKERDVLELASTQIVASPLKERDVLELASPQIEASPFHVIKVMADFIYPIGLPRLSPIEPHLLKQFRNDKKLHERAVNDMQNSWNDNLSKQSRGKEKISDSKCSWPLLTEMSDRTFSYSHDYSGPS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00538 255 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 145 IPR025610 -
Cca05g00538 255 Coils Coil 192 212 - -
Cca05g00538 255 MobiDBLite consensus disorder prediction 209 230 - -
Cca05g00538 255 PANTHER MYC 5 146 IPR045084 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00538 5 144 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 30.337 2.73e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00538 K13422 - ccaj:109811084 527.324