Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g00535 | ATGGCTGTTGGGACCATTGGTGCCATTGGAAATGGTTTGGCTTTGCCTCTCACGGTATTACCATTAGATGCTTACAAATCAGGAATTCATGAAGGTTTCATAGATGGAGTGGGTGTAGGCACAGTTGTGTTTGTTGTTTTCTGTAGTTATGGTTTCGCTGCATGGTTTGGCGCAAAGATGATAATGGAAAAATACAATGGGGGCGCGGTGATTAATGTGATTGCTGCCATGCTAACTGCTTCAATGTCTCTTGGAAAGGCATCCCCTAGCATGAGTGCTTTTGTTGCAGCCAGGCCTGAGGAACTCATATTTAATGGATTCTCTCTTCATAGACCTTGTGGCACAACTGCAGCATTAGTTGGAGAAAGTGGAAGTGGAAAGTCTACAGTTATCAGTTTGGTAGAAAGATTCTATGATCCACAGGCAGATGAAGTTCTTATTGATGGCATCAACATGAAAGAATTTCAGCTCAGCTGGATCAGAGGGAAAATTGGCCTTGTTAGGAGCTGGTGTTGTTTGCATCTAGCATTGAGGATAACTATGGAAAAGAGGGAGCAACAATTGAAGAGATAA | 573 | 0.4276 | MAVGTIGAIGNGLALPLTVLPLDAYKSGIHEGFIDGVGVGTVVFVVFCSYGFAAWFGAKMIMEKYNGGAVINVIAAMLTASMSLGKASPSMSAFVAARPEELIFNGFSLHRPCGTTAALVGESGSGKSTVISLVERFYDPQADEVLIDGINMKEFQLSWIRGKIGLVRSWCCLHLALRITMEKREQQLKR | 190 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g00535 | 190 | Coils | Coil | 182 | 190 | - | - | |
Cca05g00535 | 190 | PANTHER | - | 23 | 96 | - | - | |
Cca05g00535 | 190 | Gene3D | - | 98 | 168 | IPR027417 | - | |
Cca05g00535 | 190 | PANTHER | - | 97 | 167 | - | - | |
Cca05g00535 | 190 | PANTHER | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL | 97 | 167 | - | - | |
Cca05g00535 | 190 | PANTHER | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL | 23 | 96 | - | - | |
Cca05g00535 | 190 | Pfam | ABC transporter | 106 | 170 | IPR003439 | GO:0005524 | |
Cca05g00535 | 190 | Gene3D | ABC transporter type 1, transmembrane domain | 24 | 97 | IPR036640 | GO:0005524|GO:0016021 | |
Cca05g00535 | 190 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 98 | 169 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g00535 | Cca-Chr5 | 12080384 | 12084523 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g00535 | 97 | 173 | Calmodulin-binding Proteins | AT2G36910 | 46.753 | 1.63e-16 | 75.1 |